Our Sponsors
Related items
Common methods to discover tandem repeats
By BioStar 626 days agoTandem repeats are DNA sequences that are repeated in a contiguous manner in the genome.Basics of BLAST Programs !
By BioStar 121 days agoThe Basic Local Alignment Search Tool (BLAST) is a powerful bioinformatics program used to compare an input sequence (such as DNA, RNA, or protein sequences) against a database of sequences to find regions of similarity.MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
By Jit 2106 days agobioweb.supagro.inra.fr - MACSE aligns coding NT sequences with respect to their AA translation while allowing NT sequences to contain multiple frameshifts and/or stop codons. MACSE is hence the first automatic solution to align protein-coding gene datasets containing...Sequence Tube Maps: displays multiple genomic sequences in the form of a tube map
By Jit 1720 days agogithub.com - A JavaScript module for the visualization of genomic sequence graphs. It automatically generates a "tube map"-like visualization of sequence graphs which have been created with vg. (https://github.com/vgteam/vg) Link to working demo:...Pacman
By Rahul Nayak 3569 days agoThe pacman package is an R package management tool that combines the functionality of base library related functions into intuitively named functions.clusterProfiler
By Jit 3083 days agowww.bioconductor.org - statistical analysis and visulization of functional profiles for genes and gene clustersBioconductor version: Release (3.3)This package implements methods to analyze and visualize functional profiles (GO and KEGG) of gene and gene clusters.Author:...poRe: an R package for the visualization and analysis of nanopore sequencing data
By Jit 2558 days ago Comments (1)academic.oup.com - Motivation: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has huge potential applications. To enable these applications, the...visNetwork: an R package for network visualization, using vis.js javascript library
By Jit 2146 days agodatastorm-open.github.io - visNetwork is an R package for network visualization, using vis.js javascript library (http://visjs.org/). All remarks and bugs are welcome on github : https://github.com/datastorm-open/visNetwork. Features Based...plumber:An R package that converts your existing R code to a web API
By BioJoker 2083 days agohttps://www.rplumber.io/ - plumber allows you to create a REST API by merely decorating your existing R source code with special comments. Take a look at an example. # plumber.R #* Echo back the input #* @param msg The message to echo #* @get /echo function(msg=""){...kebabs: package provides functionality for kernel based analysis of biological sequences via...
By Rahul Nayak 997 days agowww.bioinf.jku.at - The kebabs package provides functionality for kernel based analysis of biological sequences via Support Vector Machine (SVM) based methods. Biological sequences include DNA, RNA, and amino acid (AA) sequences. Sequence kernels define...
