Comment on "Benchmarking Perl Module !"
Benchmarking a Perl module involves measuring the performance of the module in terms of its execution time and memory usage. This can be done using the P...470 days ago
Comment on "Tools for Sequence translation !"
Sequence translation is the process of converting a DNA or RNA sequence into its corresponding protein sequence. This is an important step in the analysi...476 days ago
Comment on "Calling variants in non-diploid systems"
FreeBayes is widely used for calling variants in diploid systems. However, it can also be used for calling variants in pooled samples where the number of samples is not know...1099 days ago
1156 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://pubmed.ncbi.nlm.nih.gov/32463100/1299 days ago
Comment on "Sibelia: A comparative genomics tool"
Basic usage =========== In this manual it is assumed that "Sibelia" is properly installed and the directory with "Sibelia.py" is in your "PATH" environment variable or in...1340 days ago
Comment on "Mugsy: multiple whole genome alignment tool"
Set up the environment bash source /path/to/install/mugsyenv.sh Run mugsy mugsy --directory /data/output --pref...1341 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny is the latest input in computational synteny halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignmen...1485 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant calls and regions:We developed an integration pipeline to utilize sequencing data generated by multiple technologies to generate var...1615 days ago
2154 days ago