Julia Programming Language, a Python and R rival
Big data has grown to become one of the most lucrative fields. In fact, data scientists are some of the most sought...because its core features are similar to the ones that are used on most data software. A...2122 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread and has, or is co...onarily conserved motif-like patterns in protein sequences. RNABindR -- software fo...2035 days ago
New Machine Learning Packages in R
Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras, an open source software li...1542 days ago
Software for genome assembly !
List of bioinformatics tools/Software Website References for genome assembly: 1 Falcon https://github.com/PacificBiosciences/pb-assembly 2 Canu assembler http://ca...1386 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling evaluation for improved consensus accuracy (Ara...dh)● tama (Transcriptome Annotation by Modular Algorithms) – software de...1034 days ago
Protocol for De novo Genome Assembly using Illumina Reads
In this protocol, we address and describe the de novo assembly method for small to medium-sized genomes. What is d...Genome visualisers and editors:Artemis - http://www.sanger.ac.uk/resources/software/ar...1246 days ago
Run bash script in Perl program !
...atics-related Perl scripts. It is used, for example, in the development of source codes, standalone software/tools, and algorithms in bioi...Python is commonly favoured over Perl, some bioinformatics software, such as the standalone version...679 days ago
Ancient whole genome duplication (WGD) detection tools !
There are two methods for ancient WGD detection, one is collinearity analysis, and the other is based on t...is a little troublesome to install, because it depends on a lot of software. wgd depends on the following software B...1197 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J, Ferns B, Goulder P, Nastouli...mp; Salzberg, S. L. Genome Biol. 15, R46 (2014). MUMmer: Versatile and open software fo...1089 days ago
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimming (fastp) Removal of host reads (Kraken 2; optional) Variant calling Read alignment...919 days ago