Results for "Data Structure"
Blogs
Introduction to Bioinformatics
Introduction to bioinformatics is a course for biologists and clinicians that would like to learn more about th...arch. The course covers many of the topics transformed by the emergence of big data and...1838 days ago
- This is an extract of taxdump-readme.txt to be found at ftp://ftp.ncbi...id -- node id in GenBank taxonomy database parent tax_id -- parent node id in GenBank taxonomy database rank -- rank of th...fields: division id -- taxonomy database...
1591 days ago
New Machine Learning Packages in R
Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras, an open source software libra...ing models and classifiers based on sparse matrix objects representing textual data. It...1542 days ago
Useful links to therapy, disease, drug and drug-target network data:
...Thomson Investigational drugs database including information on...onal drugs and 80000 chemical structures http://scientific.thoms...b=omim PDTD: 3D drug target structure database with a target identi...kr/~parkkw/Lnet/ TDR Targets Database: identification and ranking t...1476 days ago
Perl one-liner for beginners !
I often use the following arguments to perl: -e Makes the line of code be executed instead of a script -n For...xt > textwithoutuppercase.txt; Print only the second column of the data when...1424 days ago
10 NGS services companies around the globe !
The global NGS services market is expected to reach USD 13.1 billion by 2025...tools, pipelines and workflows, compute resources, data analysis reports, and case st...ides a variety of services such as oligo synthesis, database...1302 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling eval...ation from raw, short-read sequencing data to genotype a wide spectrum o...cripts that can assess the quality of data and the preprocessing pipelin...nd other low-complexity gene amplicon data; per...1034 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...s knowledge of the source DNA sequence length, structure or composition is inferr...o treatments for infectious diseases. Raw NGS dataReads can be saved as a Fasta...nd what the standard is like. If required, raw data cleanup/quality trimming. Choose a...1247 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J, Ferns B, Goulder P, Nastou...-9 (2009). Trimmomatic: Trimmomatic: A flexible trimmer for Illumina Sequence Data. Bol...1090 days ago
Basic Structure of Snakemake Pipeline Run !
/user/snakemake-demo$ ls config.json data envs scripts slurm-240702.out Snakefile data = mock data for the snakefile to use Snakefile = name of the snakemake “formula” file Note...977 days ago
