COSMOS, our workflow management system for NGS data
COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" seque...3601 days ago
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Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and h...genomes that approach reference quality. https://www.genomeweb.com/sequencing-technology/researchers-combine-single-mo...3248 days ago
Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assembly yet mo...an now be largely resolved with the application of this longer-read sequencing technology.3248 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations Al...genomes in the dataset were sequenced to at least 30x coverage using Illumina technology. The sequencing reads were ma...1120 days ago
RACA: Reference-Assisted Chromosome Assembly
Rreference-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and as...2978 days ago
Trimmomatic: A flexible read trimming tool for Illumina NGS data
Paired End: java -jar trimmomatic-0.35.jar PE -phred33 input_forward.fq.gz input_reverse.fq.gz output_forward_paired.fq.gz output_forward_unpaired.fq.gz output_reverse_p...2970 days ago