mmgenome: Tools for extracting individual genomes from metagneomes
The mmgenome toolbox enables reproducible extraction of individual genomes from metagenomes. It builds on the multi-metagenome concept, but wraps most of the...2154 days ago
NanoPack: visualizing and processing long-read sequencing data
The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to...2153 days ago
Hercules: a profile HMM-based hybrid error correction algorithm for long reads
...hest accuracy when most of the basepairs of a long read are covered with short reads. Availability: Hercules source code is available at https://github.com/BilkentCompGen/Hercules2143 days ago
CoLoRMap: Correcting Long Reads by Mapping short reads
...t CoLoRMap compares well with existing hybrid correction methods.The source code of CoLoRMap is freely available for non-commercial use at https://github.com/sfu-compbio/colormap eha...2143 days ago
Rebaler: program for conducting reference-based assemblies using long reads.
Rebaler is a program for conducting reference-based assemblies using long reads. It relies mainly on minimap2 for alignment and Racon for making con...2114 days ago
2105 days ago
2104 days ago
nQuire: a statistical framework for ploidy estimation using next generation sequencing
...act nuclei are not preserved. It is implemented as a stand-alone Linux command line tool in the C programming language and is available at https://github.com/clwgg/nQuireunder the MIT...2098 days ago
2098 days ago
2098 days ago