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Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological programmer or bioinformatician involves...3978 days ago
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Should you get sequenced? Not all bad genes predict disease
...aspects of the genome are going to turn out to be beneficial or potentially harmful” “As we roll out genomic medicine we are fighting against this society-wide misconc...3929 days ago
Best practices in bioinformatics training for life scientists
Among life scientists, from clinicians to environmental researchers, a common theme is the need not just to use, and gain familiarity with, bioinformatics tools and resources but al...3945 days ago
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user friendly...3980 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...kov states allows us to infer which part of the model architecture are important to capture the information which encodes the membrane topology, and gain a better understanding of t...3972 days ago
Want to Know which genome assembler rule the world ?
Assemblathon 2: evaluating de novo methods of genome assembly http://www.gigasciencejournal.com/content/2/1/10/abstract http://blogs.nature.com/news/2013/07/genome-assembly-...3947 days ago
Bio++ : C Language libraries for your biological need
...lity to estimate equilibrium frequencies.Various codon models: Muse & Gaut 1994, Yang & Nielsen 19...tribution, allowing for invariant classes.Covarion models.Model including gaps.Global clock tree likelihoo...3975 days ago
Virtual Bioinformatics Online Tutorial
There are several vitual online bioinformatics training centres. Here I provide some of them: Virtual Institute of BioinformaticsNational University of Ireland , I...3948 days ago
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Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
We study the organization and evolution of biological systems using computational biology and bioinformatics techniques. We seek to accurately predict links, such as specifi...3975 days ago
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Bioinformatician become producer/director !!!
...tak. Maine BLAST kiya. NCBI wale Data le jayenge Raju ban gaya Genefinder. Har Ligand jo dock karega. Alignment...m Apke Genome Mein Rehte Hein Do Sequence Baarah Hit Tera Ligand Chal Gaya Har Din Jo Model...3946 days ago
The Best Bioinformatics / Computational Biology Quotes
..., for all you know they might be the next curator! Beware of computational biologist they screw genes and protein. Warning! Your genome is full of garbage, delete it ! Bad or mis...3747 days ago
Bioinformatics -- Understanding of living systems through information science
...yze life. One is example is the genome. In all organisms, DNA contains genetic in...do is utilize those genome information to investigate the principles of life. As...re coming to understand the genomes of various organisms - not just humans, but m...3944 days ago
Computer Theory & Genetics: George Chao at TEDxUMNSalon
...n the spirit of ideas worth spreading, TEDx is a program of local, self-organized events that bring people...park deep discussion and connection in a small group. These local, self-organized events are branded TEDx,...3943 days ago
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Count the frequency of base G in a given DNA sequence
#!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #initialize $countG and $currentPos my $countG = 0; my $currentPos = 0; #calculate the length of $DNA...2944 days ago
At what age did you gain passion in Bioinformatics?
Most of the bioinformatician were biologist ( yeah ... not all ;), and at later stage they gain a passion in Bioinformatics and learn it. When did you get inclined towards computational analysis of biological data?3266 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...geted through the development of a number of antibody and aptamer formed against the most specific biomark...ision they should first learn at least one programing language and investigate the ways of how other resea...2389 days ago
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Next Generation Sequencing (NGS)
...Now, sequencing is almost one of the most popular technique scientific fraternity pursue worldwide to comprehand the genomic complexity of all the organism and also used to reveal g...3934 days ago
Comment on "A quick guide to Phred scaling"
...score of 20 corresponds to a base call accuracy of 99%. Logarithmic scale: The Phred scale is logarithmic, which means that each...character "!" (33 + 20). In summary, Phred scaling is a logarithmic system for representin...443 days ago
Comment on "Short-read assembly using Spades !"
...ads. If the reads are paired-end, they should be provided in separate files for each read. Run SPAdes: To run SPAdes, open the terminal and navigate to the directory where the...448 days ago