1846 days ago
2254 days ago
Computer simulation of genetic mechanism !!
...developed collaboratively by Sanford, Baumgardner, Brewer, Gibson and ReMine http://mendelsaccount.sourceforge.net/ MetaPopGen Simulates genetics in large size metapopulations https://sites.goog...3018 days ago
2663 days ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.1269 days ago
Awesome perl frameworks, libraries and software - PART 3
...ing and installation for CPAN Testers andrewrjones/perl5-App-MP4Meta - Apply iTunes-like meta data to an mp4 file admc/irs...hiles - A community driven framework of dotfiles. CPAN-API/metacpan-web - Web interface...2537 days ago
Awesome perl frameworks, libraries and software - PART 5
...rver for Plack kazuho/url_compress - a static PPM-based URL compressor / decompressor jnthn/6model - Just a place that I'm keeping some meta-model prototyping; anything t...2537 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...gardner, Brewer, Gibson and ReMine http://mendelsaccount.sourceforge.net/MetaSim A tool to generate collect...thetic reads that reflect the diverse taxonomical composition of typical metagenome data sets http://ab.inf...3780 days ago
List of In-silico Binding Site Prediction Tools
...he geometric measurements, we extensively measure the propensity of surface conservation encapsulated in the evolutionary history.(more) metaPocket: http://metapocket.eml.org/ is a met...3787 days ago
SPADes team announce new version SPADes v3.15
...pipeline for the assembly of transcriptomic and metatranscriptomic data of full-length coronaviridae genomes; - Meta-Viral and RNA-Viral pipelines...- Important improvements and corrections to the metaplasmid pipeline; - Multi...1249 days ago
Workshop on population and metagenomics analysis @ NERC
...y - 6 March 2014 providing detailed hands-on training for population and meta-genomics analysis for researc...More at http://www.eventbrite.co.uk/e/nerc-workshop-on-population-and-metagenomics-analysis-tickets-8628...3850 days ago
3812 days ago
3923 days ago
Create genome scaffolding with Perl
...($matches + $repMatches + $misMatches); if(($pid >= $projOpts->{"pid"}) && $querySeqs{$qName} && $targetSeqs{$tName}){ my %meta = (); my $shortTarget =...2351 days ago
Installing Busco version 4.0.6
...ge busco=4.0.6 Collecting package metadata (repodata.json): done So...7.0 MB conda-forge perl-cpan-meta-2.150010 | pl526_...12 KB bioconda perl-cpan-meta-yaml-0.018 | pl526_...constant-1.33-pl526_1 perl-cpan-meta bioconda/linux-64::perl-c...1496 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...applying a bioinformatics-supported genome, transcriptome, proteome, and metabolome analysis to reveal the...based on this profile. Alterations in the gene, transcript, protein, and metabolite profiles between normal...2405 days ago
2218 days ago
Comment on "R and Bioconductor Tutorial"
Useful collection of an R "meta" book can be found at http://www.r-bloggers.com/an-r-meta-book/3748 days ago