Comment on "Far Manager Commands and Links !"
...ternal program and in the file manager itself F4- here you can open a file for editing both in an external program and in the file manager itself F5- printing files F6- here you...989 days ago
Comment on "Genome assembly training tutorial at Galaxy !"
Understandinng genome assembly processes https://academic.oup.com/bfg/article/15/1/1/17418421002 days ago
Comment on "Far Manager Commands and Links !"
...r *.exe files F2 Configurable multilevel user menu F3, F4 File viewer and editor F5, F6 Rename or move. Use ShiftF5 or ShiftF6 to copy/rename sin...1010 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Molecular informatics https://onlinelibrary.wiley.com/journal/186817511041 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...tional Biology (4.620 :: 5.279) Statistical Methods in...BMC Systems Biology (2.435 :: 2.917) BioData Mining&nbs...Biomedicine (1.240 :: 1.459) IET Systems Biology (...Nature Biotechnology (41.514 :: 38.276) Nature Communic...1154 days ago
Comment on "List of non-commercial NGS genotype-calling software"
...ural variant discovery. [ paper-2014 ] manta – Structural variant and indel caller for mapped sequencing data. [ paper-2015 ]gridss – GRI...1192 days ago
Comment on "URMAP, an ultra-fast read mapper"
map command Maps unpaired reads to a reference genome. The reference genome is stored as a UFI file created by the make_ufi command. The original FASTA file fo...1333 days ago
Comment on "Sibelia: A comparative genomics tool"
...t synteny blocks shorter than 5 000 BP. You can change this...enerating a "Circos" picture 5. Interactive html-diagram of...: | | 2 | 11 | 3.82% | 6.59% | 2.41% | 2.96% | 3.3...mple. Suppose that K = 3, D = 5 and somewhere in the genome w...1334 days ago
Comment on "Basic command-line to run BLAST"
Original paper https://www.sciencedirect.com/science/article/pii/S00222836058036021344 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
Using KAT again (You will need the modules: KAT/2.1.1 and gnuplot/4.6.5) – we can plot the kmer content of the assembly compared to the kmer content of the rea...1386 days ago