1168 days ago
Computational Proteomics : Lets remember the basics
...w.com/Memorise-the-Periodic-Table The eagle genomics group provide an element of bioinformatics in periodic...ot periodic table rather bioinformatics tools with periodicals http://elements.eaglegenomics.com/ You can...3515 days ago
chromoMap-An R package for Interactive visualization and mapping of human chromosomes
...chromosomes allowing users to map chromosome elements (like genes, SNPs etc.) on t...omosome heatmap" that, in addition to mapping elements, can visualize the data asso...omosomes, it is impractical to visualize each element on the same plot. But chromoM...2169 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
...t the growing interest in larger structural variant (SV) discovery, MOSAIK provides explicit support for handling known-sequence SVs, e.g. mobile element insertions (MEIs) as well as...2934 days ago
2845 days ago
Bio++ : C Language libraries for your biological need
......).Various measures of linkage disequilibrium.etc. Numerical calculus Numerical tools: extended functions (log, factorial, etc.)Vector tools: element-wise functions, statistics (m...3976 days ago
3974 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...na data, chrConv Output: “qSNP output files are named using a 4-element pattern: ...” RADI...studying noncoding variants; integrates comprehensive set of noncoding elements, modeling their mutation cou...2937 days ago
3867 days ago
PLANT COMPUTATIONAL GENOMICS LAB – JILL WEGRZYN
...from non-model plant species. We do this by developing approaches to examine gene finding, gene expression, transcriptome assembly, and conserved element identification, through machi...1381 days ago
Implementation of biological random mutation with Perl
#!/usr/bin/perl -w use strict; use warnings; #sequence for a better recognition my $DNA="AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA \ n";...2929 days ago
Perl script to create a consensus of nucleotide sequences !
...y %H = ( A=>[], T=>[], C=>[], G=>[] ); s/\s//g for @mi; my ($w) = sort {$b $a} map {length} @mi; # set w to the length of the longest element foreach my $j ( 0 .. $...2060 days ago