Results for "Syntax Error"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser...t installed, application will display the following error message. In this example, XML...sure the cpan command is working. Following are the error message when CPAN module is n...3978 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on compu...so you are responsible for troubleshooting your own errors most of the time. We co...GB/TB of data are having maximum chances of getting errors, so please be careful and al...3736 days ago
- +22 more Blogs
Bookmarks
Bioinformatician’s Pocket Reference !!
It is amusing how brain of bioinformaticians work! Learning a new programming language f...to build our own custom workflows, and thus keeping syntax at our fingertips has become essential.Although Google is best way to get synta...3647 days ago
- You are requested to please bookmark collection of bioinfo...uence format is different, also they have different error type. High quality data is ve...ality statistical details, trimming, filtering, and error correction. Please bookmarks...
3262 days ago
- +67 more Bookmarks
Files
- DOWNLOAD LINK: https://github.com/BioInf-Wuerzburg/proovread/raw/master/util/blasr-1....I'm running "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following error: fail to open file './tempor...
2179 days ago
Pages
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced functional programming wi...reflective, general purpose object-oriented programming language that combines synta...
3975 days ago
- In our day to day research activity, we need to securely copy our data from several to local computer and visa-versa. I am jotting down some of the commonly used SCP...
3730 days ago
- +9 more Pages
Top-level pages
- Data mining, the extraction of hidden predictive information from large databases. Da...Regression - Attempts to find a function which models the data with the least error. Association rule learning -...
3974 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quan...etection and correction of sequencing errors. Kelley et al, Genome Biol 1...bMedCentral Correction of sequencing errors in a mixed set of reads. Sal...e of editing or are simply sequencing errors - the authors stand by their...3807 days ago
- +16 more Top-level pages
Wire posts
News
Update Genome Workbench 2.7.15 released
NCBI Genome Workbench is an integrated application for vie...dialog to give better diagnostics in case of a user error Graphical Sequence View: PDF...ogenetic Tree Builder Tool: improved diagnostics of errors Multiple Alignment View: op...3749 days ago
- A team from Cold Spring Harbor Laboratory has released an algorithm, called Scalpel,...ce genome, to account for simple sequence repeats that are a regular source of error in indel calling. When Scalpe...
3574 days ago
- +2 more News
ResearchLabs posts
- Gupta laboratory of Natural Information Processing at DA-IICT. Research in our lab cu...and making a computer out of bio-molecules. The key expertise of the lab is in error-correcting codes. We also wor...
3913 days ago
Fun
Golden Rules of Bioinformatics
All constant are variable. Copy and paste is a genetic error. First solve the problem, then write the code. No matter what goes wrong, it will probably look right. Any simple problem can be...3944 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformaticia...script. Idiot, Go ahead, make my data! Thank god, my genome just compiled. Error message: "Out of space on gen...3748 days ago
- +1 more Fun
Bio-Scripts
Perl script to count the number of Adenine, Thymine, Guanine and Cytosine in your DNA Sequence
#!/usr/local/bin/perl -w # While executing this script...unt_of_C = 0; $count_of_G = 0; $count_of_T = 0; $errors = 0; foreach $base (@DN...++$count_of_G; } else { print "Error - Unknown base: $base\n";...2944 days ago
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stot...m/(.*)/is) { die("ESearch returned an error: $1"); } me...UTFILE, ">" . $param{outputFile} ) or die("Error: Cannot open $param{outputFil...2944 days ago
- +32 more Bio-Scripts
Groups
Python is a programming language that lets you work more quickly and integrate your systems more effectively. Pytho...simple but effective approach to object-oriented programming. Python’s elegant synta...3974 days ago
Ruby is a dynamic, reflective, general-purpose object-oriented programming language that combines synta...3948 days ago
Comments
- ...regions : 1. Easy Syntax: Python Syntax are easy to learn and impleme...sp;Readability: Python Syntax are Clear to read since each...able pseudo-code" because its syntax mostly follows the convention...hed and where to correct your error. 7. Batteries Included:...
2547 days ago
