Comment on "nanofilt: Filtering and trimming of long read sequencing data"
Nanofilt steps https://gigabaseorgigabyte.wordpress.com/2017/06/05/trimming-and-filtering-oxford-nanopore-sequencing-reads/2095 days ago
Comment on "Long read assembly workshop !"
Bacterial genome assembly tutorial http://evomics.org/learning/assembly-and-alignment/2017-assembly-lab/2095 days ago
Comment on "Long read assembly workshop !"
Long reads assembly PPT https://www.msi.umn.edu/sites/default/files/Badalamenti_PacBio_tutorial_12-10-2014.pdf2095 days ago
Comment on "Generates a genome coverage plot with R"
Tutorial at https://bioconductor.org/packages/devel/bioc/vignettes/CoverageView/inst/doc/CoverageView.pdf2111 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Bioinformatics jobs at https://sjobs.brassring.com/TGnewUI/Search/home/HomeWithPreLoad?PageType=JobDetails&PartnerId=25196&SiteId=5189&srcqs=%5EGt26CC5P4q%2FjNyn7ih...2112 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Computers in Biology and Medicine https://www.journals.elsevier.com/computers-in-biology-and-medicine2118 days ago
Comment on "List of Bioinformatics and Computational Biology Journals"
You can also bioinformatics tools at https://www.journals.elsevier.com/information-and-software-technology/short-communications/information-and-software-technology-now-publishing-short-com2129 days ago
Comment on "Indexcov: fast coverage quality control for whole-genome sequencing"
...ment location: /home/urbe/anaconda3 added / updated specs: - goleft The follow...------------------|----------------- ca-certificates-2018.8.24 | ha4d7672_0 136 K...8-1 bioconda The following packages will be UPDATED: ca-certificates: 2018.8.13...2132 days ago
2155 days ago
Comment on "Nanopolis: polish a genome assembly"
...m -x ont2d -t 8 draft.fa reads.fa | samtools sort -o reads.sorted.bam -T reads.tmp - samtools index reads.sorted.bam python nanopolish_maker...-consensus -o polished.{1}.vcf -w {1} -r reads.fa -b reads.sorted.bam -g draft.fa -t 4 --min-c...2155 days ago