Comment on "Calling variants in non-diploid systems"
...oled samples where the number of samples is not known. This is the exact scenario we have here: in our sample we have multiple mitochondrial (or bacterial or viral) genomes, but we do...1086 days ago
Comment on "Sibelia: A comparative genomics tool"
...ATH" environment variable or input files are in the same folder with "Sibelia" executable. Directory "examples/Sibelia" contains two sets of bacterial genomes. The easiest way to...1328 days ago
Comment on "Long read assembly workshop !"
Long reads base bacterial genome assembly https://inf-biox121.readthedocs.io/en/2016/Assembly/practicals/07_Assembly_using_minasm+racon.html2082 days ago
Comment on "Long read assembly workshop !"
Bacterial genome assembly tutorial http://evomics.org/learning/assembly-and-alignment/2017-assembly-lab/2082 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Rapid pair-wise synteny analysis of large bacterial genomes using web-based GeneOrder4.0 @ http://binf.gmu.edu:8080/GeneOrder4.0/2771 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Useful bacterial gene synteny explorer @ http://archaea.u-psud.fr/synttax/ and http://archaea.u-psud.fr/absynte/2771 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
For bacterial synteny -- MicroScope: Microbial Genome Annotation & Analysis Platform @ https://www.genoscope.cns.fr/agc/microscope/home/index.php2771 days ago
Comment on "Does anyone have Nanopore latest updates?"
Improved data analysis for the MinION nanopore sequencer http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3290.html A complete bacterial genome assembled de novo using only nanopore sequencing data http://biorxiv.org/content/early/2015/02/20/0155523400 days ago