Installing Platypus on Ubuntu !
...forge openssl: 1.0.2o-0 conda-forge --> 1.0.2p-h470a237_1 conda-forge Proceed ([y]/n)? y Downloading and Extracting Packages htslib-1.9...2047 days ago
Setting up falconUnzip conda environments for genome assembly !
...h470a237_1 conda-forge zlib: 1.2.11-h470a237_3 conda-forge Proceed ([y]/n)? y Downloading and Extracting Packages python-2.7.15...2018 days ago
1581 days ago
Bash command to install bwa, samtools, picard !
...Proceed ([y]/n)? y Downloading and Extracting Packages certifi-2019.11.28...Proceed ([y]/n)? y Downloading and Extracting Packages libstdcxx-ng-9.1.0...Proceed ([y]/n)? y Downloading and Extracting Packages tktable-2.10...1584 days ago
Bash command to install GATK, Bedtools and SnpEff !
...-64::wheel-0.34.1-py38_0 Proceed ([y]/n)? y Downloading and Extracting Packages pip-20.0.2...dtools-2.29.2-hc088bd4_0 Proceed ([y]/n)? y Downloading and Extracting Packages bedtools-2.29.2...1584 days ago
1574 days ago
Install Ragout genome assembler
...will be DOWNGRADED: decorator 4.4.0-py37_1 --> 4.3.0-py37_0 Proceed ([y]/n)? y Downloading and Extracting Packages ragout-2.3...1492 days ago
1491 days ago
Install SibeliaZ in your Linux cluster !
...ill be DOWNGRADED: anaconda 2019.10-py27_0 --> custom-py27_1 Proceed ([y]/n)? y Downloading and Extracting Packages sibeliaz-1.2.2...1261 days ago
1242 days ago