Install Ragout genome assembler
...age metadata (repodata.json): done Solving environment: done ## Package Plan ## environment location: /home/anaconda3 added / updated specs: - ragout The fol...1524 days ago
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Sequence Ids conversion files !
...30.2 MB 03/07/2020, 07:47:00 232 MB 03/07/2020, 14:38:00 1.2 kB 06/09/2011, 05:30:00 11.6 kB 16/05/2020, 01:32:00 770 kB 03/07/2020, 14:38:00 special_requests/ 18/04/2020, 00...1463 days ago
Perl One-Liner to print only non-uppercase letters
#Go through file and only print words that do not have any uppercase letters. perl -ne 'print unless m/[A-Z]/' dna.fa > dnaOnlyLowercase.fa #To lowercase everything perl -pne 'tr/[A-Z]/[a-z]/' dnaUpperCase.fa >dnawithoutuppercase.fa;1444 days ago
Bash script to handle Multifasta files
#Convert all lowercase residues to uppercase in a FASTA sequence file $ awk 'BEGIN{FS=" "}{if(!/>/){print toupper($0)}else{print $1}}' input.f...1418 days ago
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Install SibeliaZ in your Linux cluster !
...a/envs/jitenv added / updated specs: - sibeliaz The f...|----------------- _anaconda_depends-2019.10 | py27_...will be INSTALLED: _anaconda_depends pkgs/main/linux-64::_anac...########################## | 100% openssl-1.1.1i | 2.5 MB...1293 days ago
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