Results for "B"

Bio-Scripts

  • Circos with circosJS

    ...t() - 20 let svg = d3.select("body") .append("svg")...{"len": 31, "color": "#8dd3c7", "label": "January", "id": "january...y"}, {"len": 31, "color": "#bebada", "label": "March", "id"...{"len": 30, "color": "#ccebc5", "label": "November", "id": "novemb...

    1580 days ago

  • Correct bash command to zip your vcf file

    bgzip -c file.vcf > file.vcf.gz tabix -p vcf file.vcf.gz #More at http://www.htslib.org/doc/tabix.html

    1579 days ago

  • Install conda on remote server !

    ...io/archive/Anaconda3-vers.num-Linux-x86_64.sh $ bash Anaconda3-version.num-Linu...um.io/archive/Anaconda3-5.0.1-Linux-x86_64.sh $ bash Anaconda3-5.0.1-Linux-x86_...nuum.io/archive/Anaconda3-4.2.0-Linux-x86_64.sh bash Anaconda3-4.2.0-Linux-x86_...

    1576 days ago

  • Exit Bash Script When Any Command Fails

    This can actually be done with a single line using the set builtin command with the -e option...s #Putting this at the top of a bash script will cause the scri...----------- #Other fancy way, by keeping the track of each co...--------------------- #With a subs exit_on_error() { ex...

    1576 days ago

  • Uninstall a perl module !

    ...y_tree($module))) { print("removing $dir\n"); rmdir $dir or warn "could not remove $dir: $!\n"; } #Run #perl uninstall_perl_module.pl Bio::SCF

    1570 days ago

  • Installing docker for Bioinformatics on Ubuntu !

    ...: 442e66405c304fa92af8aadaa1d9b31bf4b0ad94 + sudo -E sh -c a...://download.docker.com/linux/ubuntu/gpg" | apt-key add -qq -...mit: 7ad184331fa3e55e52b890ea95e65ba581ae3429 runc:...ams to a running container build Build an image from...

    1569 days ago

  • Perl script to reads and extract webpage contents !

    use 5.010; use strict; use warnings; use WWW::Mechanize; my ($url) = @ARGV; die "Usage: $0 URL\n" if not $url; my $w = WWW::Mechanize->new; $w->get($url); say $w->content; #Run #jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ perl web.pl https://bioinformaticsonline.com

    1569 days ago

  • Pack a perl program with their dependencies on Ubuntu !

    ...eps to create your own executable ./web jit@jit-HP-Pro-3335-MT:~/Downloads/autoConTAMPR/bin$ sudo apt install libpar-pa...var s = document.getElementsByTagName('script')[0]; s.paren...t to be found at ftp://ftp.ncbi.nih.gov/pub/taxonomy/...

    1567 days ago

  • Commands to install conda in Ubuntu !

    ...019.03-Linux-x86_64.sh 45c851b7497cc14d5ca060064394569f724b67d9b5f98a926ed49b834a6bb73a..., EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. Not...ntry, of encryption software. BEFORE using any encryption sof...s-1.0-py37_1 ... installing: bitarray-0.8.3-py37h14c3975_0 ....

    1567 days ago

  • Commands to install Statistics::R module in Ubuntu !

    $ sudo apt-get install libstatistics-r-perl Reading package lists... Done Building dependency tree...e following NEW packages will be installed: libstatistics-...http://in.archive.ubuntu.com/ubuntu bionic/universe amd64 r-b...l. Preparing to unpack .../libstatistics-r-perl_0.24-1_all.d...

    1567 days ago