Results for "BASE"
Bio-Scripts
Set up WGD environment using conda !
...software #BLAST #MCL #MUSCLE/MAFFT/PRANK #PAML #PhyML/FastTree #i-ADHoRe #Creat the conda ENV and install its deps #Follow the steps (base) ➜ wgd git:(master) conda c...1252 days ago
- (JitMetaENV) ➜ setu git:(master) ✗ conda install -c bioconda ragout Collecting package metadata (current_repodata.json): done Solving environment: failed with initi...
1196 days ago
Install assembly-stat using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda assembly-stats Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1103 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda ragout Collecting package metadata (current_repodata.json): done Solving environmen...
1103 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda spades Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1103 days ago
- ...-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-lat...buntu bionic/universe amd64 r-base-core amd64 3.4.4-1ubuntu1 [23...ted package m4. (Reading database ... 202932 files and director...156ubuntu4) ... Setting up r-base-dev (3.4.4-1ubuntu1) ... Pro...
1103 days ago
Install trimmomatic using Conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda trimmomatic Collecting package metadata (current_repodata.json): done Solving envir...1103 days ago
Install grabseqs using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1103 days ago
- ...ng previously unselected package libjellyfish-2.0-2:amd64. (Reading database ... 329798 files and director...triggers for libc-bin (2.27-3ubuntu1.4) ... Processing triggers for doc-base (0.10.8) ... Processing 1 ad...
1030 days ago
Tadpole is 250x faster than SPADes assembler !
...eters: extendleft=100 (el) Extend to the left by at most this many bases. extendright=100 (er) Extend to the right by at most this many bases. ibb=t (ignor...1025 days ago
