Results for "element"
Users
About me: A Computational biologist, currently investigating the impact of transposable elements on the adaptation of the rice genome under fungal pathogen challenges and genome duplication. Ex...1168 days ago
Blogs
Computational Proteomics : Lets remember the basics
...w.com/Memorise-the-Periodic-Table The eagle genomics group provide an element of bioinformatics in periodic...ot periodic table rather bioinformatics tools with periodicals http://elements.eaglegenomics.com/ You can...3515 days ago
chromoMap-An R package for Interactive visualization and mapping of human chromosomes
...chromosomes allowing users to map chromosome elements (like genes, SNPs etc.) on t...omosome heatmap" that, in addition to mapping elements, can visualize the data asso...omosomes, it is impractical to visualize each element on the same plot. But chromoM...2169 days ago
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Bookmarks
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
...t the growing interest in larger structural variant (SV) discovery, MOSAIK provides explicit support for handling known-sequence SVs, e.g. mobile element insertions (MEIs) as well as...2934 days ago
- ...Modeler are two de-novo repeat finding programs ( RECON and RepeatScout ) which employ complementary computational methods for identifying repeat element boundaries and family relatio...
2845 days ago
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Pages
Bio++ : C Language libraries for your biological need
......).Various measures of linkage disequilibrium.etc. Numerical calculus Numerical tools: extended functions (log, factorial, etc.)Vector tools: element-wise functions, statistics (m...3976 days ago
Top-level pages
- ...r problem. A simple example: finding the median in an unsorted list is first translating this problem into sorting problem and finding the middle element in sorted list. The main goal...
3974 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...na data, chrConv Output: “qSNP output files are named using a 4-element pattern: ...” RADI...studying noncoding variants; integrates comprehensive set of noncoding elements, modeling their mutation cou...2937 days ago
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Wire posts
Opportunity posts
- ...series data Population genetic inference using Pool-Seq data Evolution of gene expression in Drosophila Natural variation in transposable element defense systems Unraveling...
3867 days ago
ResearchLabs posts
PLANT COMPUTATIONAL GENOMICS LAB – JILL WEGRZYN
...from non-model plant species. We do this by developing approaches to examine gene finding, gene expression, transcriptome assembly, and conserved element identification, through machi...1381 days ago
Bio-Scripts
Implementation of biological random mutation with Perl
#!/usr/bin/perl -w use strict; use warnings; #sequence for a better recognition my $DNA="AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA \ n";...2929 days ago
Perl script to create a consensus of nucleotide sequences !
...y %H = ( A=>[], T=>[], C=>[], G=>[] ); s/\s//g for @mi; my ($w) = sort {$b $a} map {length} @mi; # set w to the length of the longest element foreach my $j ( 0 .. $...2060 days ago
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