Comment on "URMAP, an ultra-fast read mapper"
...accurate. To get the full speed improvement, the index should also be built with the -veryfast option, though UFI indexes are compatible with map regardless of whether -veryfast is...1429 days ago
Comment on "Sibelia: A comparative genomics tool"
...ks located on the positive strand are colored green, while blocks from negative strand are red. By de.... Blue edges are generated from positive strand and red edges are from negative strand respectively. Note...1431 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
Using KAT again (You will need the modules: KAT/2.1.1 and gnuplot/4.6.5) &nd...in the kmer plot? What can the kmer graph tell you about the ploidy of the organism?...1483 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
International Journal of Bioinformatics Research and Applications Indexed in Scopus (Elsevier) Academic OneFile (Gale) ACM Digital Library Current Awareness in Biological Sciences (Elsevier) Chemical Abstracts (CAS)1509 days ago
Comment on "AutoDock Vina: an open-source program for doing molecular docking."
AutoDockFR (or ADFR in short) is a protein-ligand docking program developed in the Sanner laboratory at Scripps Research under the AutoDock umbrella. https://ccsb.scripps.edu/adfr/1567 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
... halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://academic.oup.com/gigascience/article/9/6/giaa047/58...1576 days ago
Comment on "Learning Python Programming - a bioinformatician perspective !"
Python for Biologist http://userpages.fu-berlin.de/digga/p4b.pdf1578 days ago
Comment on "Setting up autoConTAMPR !"
...adataRunning install for module 'App::cpanminus'Running make for M/MI/MIYAGAWA/App-cpanminus-1.7044.tar.gzFetching with LWP:http://espejito.fder.edu.uy/cpan/authors/id/M/MI/MIYAGAWA/App-cpanminus-1.7044.tar.gz...1588 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
NAR Genomics and Bioinformatics https://academic.oup.com/nargab accept tools and software1592 days ago
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