Comment on "Does anyone have Nanopore latest updates?"
Virus reveals Nanopore mechanism: http://www.nanowerk.com/nanotechnology-news/newsid=36061.php http://www.nature.com/ncomms/2014/140616/ncomms5171/full/ncomms5171.html3650 days ago
Comment on "Next generation sequencing in R or bioconductor environment"
We generally receive some common question like ... where to find human reference genome? What is reference annotation, how to download it etc. Here are some resources...3665 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
There are several other softwares Eland: http://illumina.ucr.edu/illumina_docs/Velvet:http://www.ebi.ac.uk/~zerbino/velvet/Maq (Mapping and Assembly with Quality): ht...3666 days ago
Comment on "Next generation sequencing in R or bioconductor environment"
R package SPP for chip-seq analysis. It can read quite a few aligner's output file. Here is the original package tutorial. http://compbio.med.harvard.edu/Supplements/C...3667 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
NGS related research paper on Bioinformatics Journal @ http://www.oxfordjournals.org/our_journals/bioinformatics/nextgenerationsequencing.html3668 days ago
Comment on "Does anyone have Nanopore latest updates?"
Another Nanopore sequencing based startup come into market: Quantapore Inc., Address: 1455 Adams Drive, Suite 1081, Menlo Park, CA 94025, Email: info@...3677 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
The FindMotif.pl program uses position-specific scoring matrices to search for sequences similar to a consensus sequence. Find more at http://www.people.vcu.edu/~elhaij/IntroBioinf/Notes/PSSM-Perl.html3681 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
Some of the useful Unix onliner http://genomics-array.blogspot.in/2010/11/some-unixperl-oneliners-for.html3707 days ago
Comment on "R and Bioconductor Tutorial"
NGS with R ShortRead – Quality assesment of the reads, finding duplicates, trimming, string pattern searches [1] Biostrings – Reading sequences in R [2...3714 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
r2cat (related reference based contig arrangement tool) can be used to order a set of contigs with respect to a single reference genome. This is done by mapping the co...3718 days ago