Results for "Bioinformatics Scientist"
Blogs
Run bash script in Perl program !
BioPerl is a compilation of Perl modules that can be used to build bioinformatics-related Perl scripts. It is u...only favoured over Perl, some bioinformatics software, such as the standal.... IPC::Open2 More at https://bioinformaticsonline.com/snippets/view/42919...on: a2p More help at https://bioinform...650 days ago
Ancient whole genome duplication (WGD) detection tools !
There are two methods for ancient WGD detection, one is collinearity analysis,...hiyang2 012/WGDdetectorhttps://bmcbioinformatics.biomedcentral.com/articles/10...// github.com/arzwa/wgdhttps://bmcbioinformatics.biomedcentral.com/articles/10..., you need to register at http:// bioinform...1168 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong S...Keane JA, Kellam P, Otto TD. Bioinformatics. 2015 Jul 15;31(14):2374-6. doi: 10.1093/bioinformatics/btv120. Epub 2015 Feb 28. Ad...z, A. & Grabowski, S. BMC Bioinformatics 14, 160 (2013). Kraken: Krak...1060 days ago
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimming (fastp) Removal of host reads (Kraken 2; optional) Variant calling Read alignment...890 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. &b...pression of FASTQ files, Bioinformatics, 2014; 30(15):2213&ndash...for raw sequencing data, Bioinformatics, 2018; 34(16):2748&ndash...ating k -mer statistics, Bioinformatics, 2017; 33(17):2759&ndash...876 days ago
List of comparative genomics resources !
3D-GENOMICS -- A Database to Compare Structural and Functional Annotations of Proteins between Sequenced Genomes Comp...alysis of genomic sequences. cBARBEL -- Catfish Breeder and Researcher Bioinform...690 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw This two minute video will change your mind on reproducible research 2. Parallel...554 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence Repeats (SSRs), which are also known...nces from various organisms. These are just a few examples of the many bioinform...438 days ago
Bioinformatics Tools for Phylogeny !
Direct access to the individual tools available on this server. Multiple Alignment:Phylogeny:Tree viewers:Utilities: MUSCLE PhyML TreeDyn Gblocks T-C...194 days ago
- Downloading 16S rRNA databases can be crucial for various bioinformatics analyses, especially in microbiome research. However, it's important...Microbial Ecology): QIIME (https://qiime2.org/) is a widely used bioinform...
24 days ago
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