Results for "Case"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...er-2.36Build the perl module: Build by running Makefile.PL, remember the case sensitivity, make and make te...a(3) Central America(4) Europe(5) North America(6) Oceania(7) South AmericaSelect your continent (or severa...3944 days ago
Five points for bioinformatics software/tools
...tary tools does not absolve you of the need to actually read and research the type of analysis that you are doing. This is particularly true in the case of genome assembly and annota...3701 days ago
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Bookmarks
Rdatamining.com : R and Data Mining
...mining are available to download for non-commercial personal use, including R Reference card for Data Mining, R and Data Mining: Examples and Case Studies and Time Series Analy...3909 days ago
Public Databases for Bioinformatics !
...ids: os.waitpid(pid, 0) ofp.close() print "FINISHED" For use case 1 we obtained the following E...p://hgdownload.cse.ucsc.edu/goldenPath/hg38/bigZips/hg38.fa.gz. For use case 2 we used the set of narrowPe...1133 days ago
- +15 more Bookmarks
Files
Bioinformatician needs ten heads !!!
Bioinformatics demands more and ... lots more knowledge. In this case Ravan, a mythological character from the Ramayan, can only be a real bioinformatician. :) :P3905 days ago
Discussion topics
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3939 days ago
Pages
Bio++ : C Language libraries for your biological need
...ence, open and store in string arrays, etc.Text: convert text to any other type and vice versa, remove spaces, tokenize, switch between upper/lower case, etc.Applications: read optio...3941 days ago
Linux SSH Client Commands for Bioinformatics
...troubleshoot any SSH connection issues. For this purpose, pass -v (lowercase v) option to the ssh as shown...lhost to perform some activity and go back to remote host again. In this case, you don’t need to disc...3700 days ago
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Top-level pages
Most Commonly used Awk by Bioinformatician
...chieve all its functionality with Perl, awk is simpler in many practical cases. Why awk? You can replace a...mple CSV: awk -F, '{print $1,$2}' substitution (sed is simpler in this case): awk '{sub(/test/, "no", $0...3906 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ical data in R. Many books on specific topics in R programming are also available through Amazon or other vendors. Cloud computing resources The case for cloud computing in genome...3773 days ago
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Wire posts
News
Update Genome Workbench 2.7.15 released
...e View: fixed crash on zooming in and out, related to SNP track Graphical Sequence View: fixed Go To Position dialog to give better diagnostics in case of a user error Graphical Se...3715 days ago
UK executive accused in GlaxoSmithKline China probe
Mark Reilly and two other colleagues are also suspected of bribing government officials in Beijing and Shanghai, they said. Police have handed the case over to prosecutors, official...3638 days ago
- +5 more News
Opportunity posts
Research Associate @ INDIAN INSTITUTE OF SPICES RESEARCH
...ficate will not be allowed to attend the Test/Interview. Note: All relevant certificates (in original) and bio data, No objection certificate in case he/she is employed elsewhere...3764 days ago
Research Associate @ INDIAN INSTITUTE OF SPICES RESEARCH
...ficate will not be allowed to attend the Test/Interview. Note: All relevant certificates (in original) and bio data No objection certificate in case he/she is employed elsewhere...3778 days ago
- +33 more Opportunity posts
Video
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3898 days ago
What Is Personalized Medicine?
...e goal of this short film is to introduce the audience to the emerging field of personalized cancer treatment. The story is loosely based on a rare case studied at the BC Cancer Agen...3700 days ago
Bio-Scripts
Create genome scaffolding with Perl
...$b1 eq " ") || ($b2 eq " ")){ ## equal bases, or absent bases, so consensus is easy return($b1); } # if different, convert to upper case to simplify lookup my $bc...2302 days ago
Install Parrot Virtual Machine !
...ystem to figure out how to build Parrot. The process is completely automated, unless you passed in the `--ask' flag on the command line, in which case I'll prompt you for a few pi...1531 days ago
- +9 more Bio-Scripts
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Comments
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...give you the perl that's located within your conda environment. In this case, it should install things int...also install most Perl packages via conda. Replace the ':' by '-', lower-case everything, and add 'perl-' t...410 days ago
- ...ween single query genome and multiple reference genomes: $ ./fastANI -q [QUERY_GENOME] --rl [REFERENCE_LIST] -o [OUTPUT_FILE] For above use case, REFERENCE_LIST should be a f...
1095 days ago
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