Tools to detect synteny blocks regions among multiple genomes
...ation of blocks of order within two sets of chromosomes that are being compared with...The genomes may be represented by sequenced chromosomes (pseudomolecules), by draft s...a 'SyntenyView' page displays a diagram of chromosomes with blocks of conserved synt...2615 days ago
Dynamic chromosome breakpoints !!!
...vision and segregation of identical sets of chromosomes into daughter nuclei and nucl...vement gets start and pulled DNA apart, the chromosomes are free to undergo recombina...ers are caused by the loss or gain of whole chromosomes, which affect the copy number...3557 days ago
Tools and Method for Haplotype phasing !
...me. Since sequence and SNP array data normally take the form of unphased genotypes, one does not specifically observe which of the two parental chromosomes, or haplotypes, falls on a sp...1343 days ago
chromoMap-An R package for Interactive visualization and mapping of human chromosomes
...active, configurable and elegant graphics visualization of the human chromosomes allowing users to map chromos...terpretations and research work. Because of the enormous size of the chromosomes, it is impractical to visuali...2145 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...enome assembly?The method of taking a large number of short DNA sequences and placing them back together to create a reflection of the original chromosomes from which the DNA originated...1209 days ago
Ancient whole genome duplication (WGD) detection tools !
...pt/miniconda3/envs/wgd/make -j 4 make insatall Take the sugarcane genome Saccharum spontaneum L as an example. The genome is 8-ploid with 32 chromosomes (2n = 4x8 = 32) Download the...1160 days ago
List of comparative genomics resources !
...Comparative Genometrics (CG) -- a database dedicated to biometric comparisons of whole genomes Conduct comparative biometric analysis of chromosomes of different organisms....682 days ago
Finding a mimicry game for teaching on-line and mentioned general resources
...lution in general https://evolution.berkeley.edu/evolibrary/home.php Mitochondrial Eve: https://projects.ncsu.edu/cals/gn/ex/mit-eve.html Y chromosomes: https://projects.ncsu.edu/c...682 days ago
Useful link to teach evolution !
...lution in general https://evolution.berkeley.edu/evolibrary/home.php Mitochondrial Eve: https://projects.ncsu.edu/cals/gn/ex/mit-eve.html Y chromosomes: https://projects.ncsu.edu/c...582 days ago
Chromosome breakpoint - a breakup to remember
...a translocation, genetic material is exchanged between two different chromosomes, resulting in a balanced or u...in the formation of complex chromosomal rearrangements, such as ring chromosomes or dicentric chromosomes. The...430 days ago