ASplice: a scalable and memory-efficient algorithm for de novo transcriptome assembly
...braries as possible that contain hundreds of gigabases of data. New techniques are developed so that computations can be performed on a computing cluster with moderate amount of physi...2136 days ago
Heatmapper: web-enabled heat mapping for all
...at allows users to easily create a wide variety of heat maps for many different data types and applications. Heatmapper allows users to generate, cluster and visualize: 1) expr...2046 days ago
2011 days ago
PANEV: an R package for a pathway-based network visualization
...from 1 to n) of interconnected upstream and downstream pathways. The network graph visualization helps to interpret functional profiles of a cluster of genes. https://bmcbioinfo...1550 days ago
1364 days ago
MMseqs2: ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implem...1206 days ago
Applying MinHash to cluster RNAseq samples
A kmer blog worth spending time on986 days ago
972 days ago
MMseqs2: ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implem...945 days ago
397 days ago