NCBI Prokaryotic Genome Annotation Pipeline
...nnotate bacterial and archaeal genomes (chromosomes and plasmids). Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other funct...2545 days ago
RNAcon: web-server for the prediction and classification of non-coding RNAs
RNAcon is a web-server for the prediction and classification of non-coding RNAs. It uses SVM-based model for the discrimination between coding and ncRNAs and RandomForest-b...2483 days ago
PLAR: Pipeline for lncRNA annotation from RNA-seq data
...her species identified by PLAR. Available here. Species Assembly Code Transcriptome lncRNAs Protein-coding Human hg19...848 days ago
P_RNA_scaffolder: a fast and accurate genome scaffolder using paired-end RNA-sequencing reads
...st and accurate tool using paired-end RNA-sequencing reads to scaffold genomes. This tool aims to improve the completeness of both protein-coding and non-coding genes. After this tool was ap...2153 days ago
2173 days ago
P_RNA_scaffolder: a fast and accurate genome scaffolder using paired-end RNA-sequencing reads
...ffolder ) for scaffolding genome sequences. The most important feature of this method is to improve the completeness of gene regions and long-coding gene regions (for instance,&n...2066 days ago
S-plot2: creates an interactive, two-dimensional heatmap of sequences
..., analyze, and automate BLAST queries of regions of interest within the heatmap. This facilitates the investigation of quickly evolving coding regions, novel coding regions, and laterally transf...2045 days ago
S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences
..., analyze, and automate BLAST queries of regions of interest within the heatmap. This facilitates the investigation of quickly evolving coding regions, novel coding regions, and laterally transf...2041 days ago
Ancestral Genomes: a resource for reconstructed ancestral genes and genomes across the tree of life
...(http://ancestralgenomes.org) is a resource for comprehensive reconstructions of these ‘fossil genomes’. Comprehensive sets of protein-coding genes have been reconstructed...2010 days ago
1940 days ago