Correct bash command to zip your vcf file
bgzip -c file.vcf > file.vcf.gz tabix -p vcf file.vcf.gz #More at http://www.htslib.org/doc/tabix.html1537 days ago
Exit Bash Script When Any Command Fails
...actually be done with a single line using the set builtin command with the -e option. #1----...------------- # exit when any command fails #Putting this at the t...ause the script to exit if any commands return a non-zero exit code....eep track of the last executed command trap 'last_command=$curre...1534 days ago
Installing docker for Bioinformatics on Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo apt-get remove docker docker-engin...ds$ docker Usage: docker [OPTIONS] COMMAND A self-sufficient runtime...on information and quit Management Commands: builder Manage build...AND --help' for more information on a comm...1527 days ago
Pack a perl program with their dependencies on Ubuntu !
#Follow steps to create your own executable ....ipt web.pl at https://bioinformaticsonline.com/snippets/view/41440/perl-...PR/bin$ ./web https://bioinformaticsonline.com #It return this W...al for all your medical needs like, online doctor appointment, Online bo...1525 days ago
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Command to sort the bed file !
#Command to sort the bed file sort -V -k1,1 -k2,2 test.bed1403 days ago
picard tools command to get some insert statistics
#picard tools to get some insert statistics to see whether our reads seem to be in the correct place #module load picard/2.0.1 java -Xmx16g -XX:PermSize=8g -jar $P...1351 days ago
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