Results for "Config"
Bio-Scripts
Perl script to run in parellel !
...@_; open FILE, ">$fn" or die $!; system ("augustus --species=caenorhabditis --outfile=$fn $seq --AUGUSTUS_CONFIG_PATH=/home/urbe/Tools/Alienomics_v1.1/augustus.2.5.5/config"); close FILE or die $!;...1684 days ago
Bash commandline to install Anaconda !
..._0 ... installing: mpc-1.1.0-h10f8cd9_1 ... installing: sqlite-3.27.2-h7b6447c_0 ... installing: unixodbc-2.3.7-h14c3975_0 ... installing: fontconfig-2.13.0-h9420a91_0 ... instal...1553 days ago
Bash command to install Miniconda !
(base) [wsu29@bladeamd-2 tmp]$ wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh --2020-02-01 13:25:25-- https://repo.anaconda.com/miniconda/...1553 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...‘crayon’, ‘fansi’, ‘pillar’, ‘pkgconfig’, ‘digest’, ‘gtable’, ‘lazyev...loud.r-project.org/src/contrib/pkgconfig_2.0.3.tar.gz' Content type '...vailable... yes checking for pkg-config... /usr/bin/pkg-config check...* installing *source* package ‘pkgconfig’ ... ** package ‘pkgconfig’...1548 days ago
- ...tu-0ubuntu2.15 [520 kB] Fetched 2,912 kB in 3s (923 kB/s) Preconfiguring packages ... Selecting...tting up samba-common (2:4.7.6+dfsg~ubuntu-0ubuntu2.15) ... Creating config file /etc/samba/smb.conf with...
1537 days ago
Installing docker for Bioinformatics on Ubuntu !
...A self-sufficient runtime for containers Options: --config string Location of client config files (default "/home/jit/.do...processes within one or more containers update Update configuration of one or more contain...1511 days ago
Pack a perl program with their dependencies on Ubuntu !
#Follow steps to create your own executable ./web jit@jit-HP-Pro-3335-MT:~/Downloads/autoConTAMPR/bin$ sudo apt install libpar-packer-perl Reading package lists......1509 days ago
Commands to install conda in Ubuntu !
..._0 ... installing: mpc-1.1.0-h10f8cd9_1 ... installing: sqlite-3.27.2-h7b6447c_0 ... installing: unixodbc-2.3.7-h14c3975_0 ... installing: fontconfig-2.13.0-h9420a91_0 ... instal...1509 days ago
- (JitMetaENV) ➜ ~ conda install -c bioconda quast Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer versio...
1213 days ago
- (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 ---...
1440 days ago
