2658 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl module...use "yum" for the rescue. Dont worry biological data cruncher, this is true we are...scanning (atstart or never)? [atstart]Cache metadata (yes...3966 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Bei...3966 days ago
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3961 days ago
3961 days ago
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We...3969 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...atic prediction of trans-membrane (TM) protein structure. While algorithm for ide...opology for 77% of the sequences in a standard dataset of 86 proteins with superv...Conclusion/Implementation: Here discriminant data mining approach was used to predic...3961 days ago
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used...st to Bio-informatics work that is math heavy and deals with a large amount of data.3968 days ago
3936 days ago
Bio++ : C Language libraries for your biological need
...e Acnuc Access), allowing you to fetch public databases like GenBank, EMBL or Sw.... Phylogenetics and molecular evolution Data structure and IO Phylogenetic tre...ace (works with Function objects).Statistics: DataTable object, with I/O from CSV fil...3964 days ago
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R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. Thi...3956 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a netwo...lyze Next Generation Sequencing (NGS) data analysis. In the context of a...rder to ensure compliance of produced datasets with pipelines requiremen...ional facilities and expertise in NGS data anal...3965 days ago
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Bioinformatician become producer/director !!!
...e se Genome tak. Maine BLAST kiya. NCBI wale Data le jayenge Raju ban ga...ona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database Search Kare Bioinformati...h Desh Mein Day Hoff Rehta Hai PDB Ek Numbari Structure Dus Numbari GCG Karo Sajana...3935 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to change the b...mes. I'm BioGeek. Fedup with LIPS, try God script. Idiot, Go ahead, make my data! Th...3736 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
...tury: Making Sense out of Massive Data Air date: Wednesday...ncrease in genomic and biomedical data, which will soon outstrip adv...ng new science from these massive datasets will require not only fas...tral graph theory and modern data structures, can be used to attack chall...3918 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a r...to certain lifestyle-related diseases, by understanding their personal genome data. So,...3933 days ago
1233 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has...ad().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("data/alls...1152 days ago
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome proj...tics provides the tools to analyse and exploit such data sets...3432 days ago
At what age did you gain passion in Bioinformatics?
Most of the bioinformatician were biologist ( yeah ... not all ;), and at later stage they gain a passion in Bioinformatics and learn it. When did you get inclined towards computational analysis of biological data?3255 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...of the project. The molecular structures involved in the develop...high-throughput experimental data in an integrated manner and b...e for prokaryotic TCS protein structure prediction and inhibitor desi...With the increasing amount of data in databases, there is already a m...2378 days ago
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Comment on "Tools to detect synteny blocks regions among multiple genomes"
...is the comparison of the genomic structure and gene content of two...he selected species from a public database, such as NCBI or Ensembl....them to other sources of genomic data, such as gene expression or functi...thorough understanding of genome structure, gene content, and evolutiona...439 days ago
Comment on "Running Trinity on RNA-seq !"
...ur assembled transcripts and the input RNA-Seq data. Such studies might include:...e. If there are any confounding aspects to the data, such as outliers or batch ef...the Trinity transcriptome assemblies for gene structure annotation using PASA....2139 days ago