Results for "Data Structure"
Users
Skills: Data Structure2640 days ago
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl module...use "yum" for the rescue. Dont worry biological data cruncher, this is true we are...scanning (atstart or never)? [atstart]Cache metadata (yes...3948 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Bei...3948 days ago
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Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3943 days ago
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days, easy to analyse the large scale genomics datasets. But we need to understan...e background of software/tool to better explain the data comp...
3943 days ago
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Files
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We...3951 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...atic prediction of trans-membrane (TM) protein structure. While algorithm for ide...opology for 77% of the sequences in a standard dataset of 86 proteins with superv...Conclusion/Implementation: Here discriminant data mining approach was used to predic...3943 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used...st to Bio-informatics work that is math heavy and deals with a large amount of data.3950 days ago
- The key to finding a solution is to notice that most genomicsequences differ by v...is increasing rapidly, but the actual amount of new data is very small. In other words...pedia.org/wiki/Compression_of_Genomic_Re-Sequencing_Data htt...
3918 days ago
Pages
Bio++ : C Language libraries for your biological need
...e Acnuc Access), allowing you to fetch public databases like GenBank, EMBL or Sw.... Phylogenetics and molecular evolution Data structure and IO Phylogenetic tre...ace (works with Function objects).Statistics: DataTable object, with I/O from CSV fil...3946 days ago
- ...rotein Sequence Alignment and Database Scanning Geoff Barto...rrently Glycoscience, Protein Structure. LASSAP a LArge Scale S...World , Dec. 10, 2002. Data stored in multiplying bacteria&nbs...Guide to protein sequence and structure analysis at UCL Feel...
3919 days ago
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Top-level pages
- ...f large amounts of biological data, using networks of computers and databases." - from the glossary fo...tion of a protein. Protein 3D structures are stored in specific databases (for example, the Protein Dat...tion. The increased speed of structure determination necessary for t...
3945 days ago
- Data mining, the extraction of hidden predictive information from large databases. Data mining is becoming an increas...n answer. This is exploratory data analysis, one of the most dif...ustrating positions to be in. Data mining is a huge field and ca...covering hidden value in your data ware...
3944 days ago
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Wire posts
News
- InterpretOmics, a big data analytics startup that focuses on life sciences, has received angel funding of around Rs 10 crore from a group of investors including Singapore's information technology and shipping company, Amarante. http://www.interpretomics.co/
3918 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. Thi...3938 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a netwo...lyze Next Generation Sequencing (NGS) data analysis. In the context of a...rder to ensure compliance of produced datasets with pipelines requiremen...ional facilities and expertise in NGS data anal...3947 days ago
- van Noort Group is looking for PhD fellows We currently access an unp...nologies produce large amounts of raw data that can be transformed into...from the growing amount of biological data becoming available and turn b...e based on a combination of published data. An...
3947 days ago
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ResearchLabs posts
- The human genome project and similar projects in disease-causing organisms such as Plasmodium falciparum, which c...ing in human disease. Research Area: Analysis of Next Generation sequence data in c...
3946 days ago
- Statistical functional genomics in experimental medicine The genome projects and the accelerated development of...al and biological backgrounds. Research Area: Linear models for microarray data Dig...
3946 days ago
- +53 more ResearchLabs posts
Fun
Bioinformatician become producer/director !!!
...e se Genome tak. Maine BLAST kiya. NCBI wale Data le jayenge Raju ban ga...ona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database Search Kare Bioinformati...h Desh Mein Day Hoff Rehta Hai PDB Ek Numbari Structure Dus Numbari GCG Karo Sajana...3917 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to change the b...mes. I'm BioGeek. Fedup with LIPS, try God script. Idiot, Go ahead, make my data! Th...3718 days ago
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Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
...tury: Making Sense out of Massive Data Air date: Wednesday...ncrease in genomic and biomedical data, which will soon outstrip adv...ng new science from these massive datasets will require not only fas...tral graph theory and modern data structures, can be used to attack chall...3900 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a r...to certain lifestyle-related diseases, by understanding their personal genome data. So,...3915 days ago
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Bio-Scripts
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1215 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has...ad().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("data/alls...1134 days ago
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Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome proj...tics provides the tools to analyse and exploit such data sets...3414 days ago
At what age did you gain passion in Bioinformatics?
Most of the bioinformatician were biologist ( yeah ... not all ;), and at later stage they gain a passion in Bioinformatics and learn it. When did you get inclined towards computational analysis of biological data?3237 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...of the project. The molecular structures involved in the develop...high-throughput experimental data in an integrated manner and b...e for prokaryotic TCS protein structure prediction and inhibitor desi...With the increasing amount of data in databases, there is already a m...2360 days ago
Groups
...ject dedicated to providing a Java framework for processing biological data. It provides analytical and s...or common file formats and allows the manipulation of sequences and 3D structures. The goal of the biojava pro...3901 days ago
R is a free software programming language and a software environment for stat...age is widely used among statisticians and data miners for developing statistical software and data analysis. R's popularity has...d comprehension of high-throughput genomic data. Bio...3949 days ago
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Tags
Skills: Ms Office, C, C++, HTML, CSS, Data Structure, Java, Linux, Biochemistry, FASTA, BLAST
2640 days ago
Comments
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...is the comparison of the genomic structure and gene content of two...he selected species from a public database, such as NCBI or Ensembl....them to other sources of genomic data, such as gene expression or functi...thorough understanding of genome structure, gene content, and evolutiona...421 days ago
Comment on "Running Trinity on RNA-seq !"
...ur assembled transcripts and the input RNA-Seq data. Such studies might include:...e. If there are any confounding aspects to the data, such as outliers or batch ef...the Trinity transcriptome assemblies for gene structure annotation using PASA....2121 days ago
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