Dynamic chromosome breakpoints !!!
...ain the genome hotspots/Evolutionary Breakpoint Regions(EBRs)/fragile regions/weak fragments/ in my next blog. Software for recombination detection: RAT http://cbr.jic.ac.uk/di...3546 days ago
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Next Generation Sequencing (NGS) Tutorials
...sequencing data PubMed: 21478889 SNiPlay: a web-based tool for detection, management and analysis of S...b.ch/training/training-activities-schedule/archive-2013.html Variant Detection (Model organism) Advanced tut...3481 days ago
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Genome Assembly Tools and Software - PART2 !!
...d method for constructing the string graph. MindTheGap 1.0.0 – Detection and Assembly of Insertion VariantsMindTheGap is a software that performs detection and assembly of DNA insertion...2679 days ago
Bioinformatics in Africa: Part6 - Sudan
...brary. Research Interest and Activities: 1. Plant Genetic Transformations2. Molecular Population Genetics 3. Detection of human and&n...1177 days ago
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Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'
...nd DNA approach to unravel genetic regulation in cancer' Abstract Whole exome DNA sequencing (WES) or whole genome DNA sequencing (WGS) allows detection of mutations and polymorphism...3364 days ago
Structural polymorphism analysis from NGS data
...equence variation, functional variation, gene/protein expression and phenotypic adaptation. The successful candidate will be in charge of the detection of polymorphisms including st...3942 days ago
Clinical Genomics & Informatics Europe at Lisbon, Portugal
...ome Informatics, and RNA-Seq and Transcriptome Analysis, as well as two pre-conference symposia on Clinical Epigenetics and Quantitative Digital Detection Technologies. The conference...3910 days ago
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Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...d network databases and visualization and analysis software. Predicting biologically relevant protein interactions Cellular network evolution Detection of cell type and stage active...3941 days ago
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Pack a perl program with their dependencies on Ubuntu !
...emo:... Jit@jit.aber SvABA: Structural variation and indel detection by local assemblyBy Jit 6 days ago SvABAStructuralvariationindeldetectionlocalassembly github.c...1504 days ago
DeCoSTAR - Detection of Co-evolution
DeCoSTAR is a software which aims at reconstructing ancestral gene or genome organizations, in the form of sets of neighborhood relations -adjacencies- between pairs of ancestral genes or gene domains.Ancestral genes or domains are deduced from reconciled gene trees in a context of birth, speciat...Tags: Bioinformatics, DeCoSTAR, Detection, Co-evolution, Reconstruction, Ancestral, Gene, Genome
2571 days ago
NovelSeq: Novel Sequence Insertion Detection
The NovelSeq framework is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data. http://novelseq.sourceforge.net/Home Paper at https://www.ncbi.nlm.nih.gov/pubmed/20385726Tags: NovelSeq, Novel, Sequence, Insertion, Detection
2515 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
SynChro seems to be the fastest synteny detection tool. http://www.lcqb.upmc.fr/CHROnicle/SynChro.html https://pdfs.semanticscholar.org/5320/68e328d1aaefa435eefe679f54c018e5c2aa.pdf...1587 days ago
Comment on "Structural variation: the hidden genomic treasure"
Structural variant detection and association testing https://github.com/zeeev/wham2620 days ago