List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread and has, or is co...tes. PEDANT -- Protein Extraction, Description and ANalysis Tool Conduct genome...1987 days ago
CANU genome assembly parameters !
...false. This specifications should be for your project discussed with a local compu...-p \ -d \ genomeSize=[g|m|k] \...nu -p test_asmbl \ -d asm_test3 \ genomeSize=2m \ -maxThreads=2 u...1939 days ago
List of tools frequently used while genome assembly
List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1)...18) Nanopolish (v. 0.8.3) I have used the following tools to assess genome...1924 days ago
New Machine Learning Packages in R
Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras, an open source software library for automated machine learning. See README ...1494 days ago
Software for genome assembly !
List of bioinformatics tools/Software Website References for genome assembly: 1 Falcon https://github...ub.com/lh3/miniasm 4 PBJelly scaffolding tool https://sourceforge.net/projects/pb-jelly/ 5 ARCS scaffoldin...1338 days ago
10 NGS services companies around the globe !
...ms. The company’s genome services are suitable for custom/tailored projects that allow access to genomi...obe designing, array layouts, project designing, and nucleic acid a...Popular mentions – MedGenome (India), DNA Link, Inc. (South...1253 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling...; algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction wit...riptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio A...long transcriptomic reads to a genome,...986 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...hod for small to medium-sized genomes. What is de novo genome assembly?The method of taking...on a sequencing computer in a genome sequencing experiment. Depend...genomes from read mappings. Genome finishing tools:Semi-automate...p://www.jcvi.org/cms/research/projects/annotation-service/ Frequen...1198 days ago
Common Bioinformatics Interview Questions !
The possibility of an interview for a bioinformatics posi...u want to extend your research and create your own projects within the community. 4. Wi...bioinformatician that is able to work on a single project autonomously, or they may nee...1192 days ago
Ancient whole genome duplication (WGD) detection tools !
There are two methods for ancient WGD detection, one is collinearity analysis, and the other is based o.../miniconda3/envs/wgd/make -j 4 make insatall Take the sugarcane genome Saccharum spontaneum L as an example. The genome...1149 days ago