Results for "Genome-Wide"
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Comment on "Short-read assembly using Spades !"
Short-read assembly is the process of constructing a genome sequence from a large number of short sequencing reads. SPAdes (St. Petersburg genome asse...429 days ago
- There are several tools available for short read simulators that are widely used in bioinformatics research. Here are some of them: ART: The ART...
429 days ago
Comment on "Short-read assembly using Spades !"
SPAdes (St. Petersburg genome assembler) is a popular tool for short-read assembly. It can assemble reads generated from Illumina, IonTorrent, PacBio,...435 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Genome synteny analysis is the comparison of the genomic structure and gene content of two or more related species. Here are some general steps to follow for conducting a...437 days ago
Comment on "CovCal: Coverage / Read Count Calculator"
Sequencing coverage is defined as the average number of reads that covers each base of the reference genome. Estimating the sequencing coverage is very imp...597 days ago
Comment on "Genome assembly training tutorial at Galaxy !"
Understandinng genome assembly processes https://academic.oup.com/bfg/article/15/1/1/1741842967 days ago
Comment on "Estimate Genome Size with Jellyfish and R"
Jellyfish manual at http://www.genome.umd.edu/docs/JellyfishUserGuide.pdf995 days ago
- Usage Summary Produce help page. Quickly check the software usage and available command line options. $ ./fastANI -h One to One. Compute ANI betwee...
1115 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics Journals Ranks from Google Scholar 1: Bioinformatics Journals (the most recent Impact Factor :: 5-year Impact Factor) WIREs Computational Molecular Sci...1118 days ago
- DeepConflation based CNN model is used to generate alignment of fasta file . Model try to match a query string in a referance genome to provide location of match. https://github.com/gguptaiitd/DeepConflation
1160 days ago
