2308 days ago
HTTDB - Horizontally transferred transposable elements database
Transposons or Transposable elements (TEs) are "mobile genes" capable of mobilization from one genomic location t...ult to draw major conclusions about HTT patterns, such as where in the tree of life th...2305 days ago
PLAR: Pipeline for lncRNA annotation from RNA-seq data
Due to several requests, we are releasing an assingment of orthologs, determined using the same methods used in Hezroni et al. (BLAST, Whole Genome Alignment (WGA), and...860 days ago
alienness : Rapid Detection of Candidate Horizontal Gene Transfers across the Tree of Life
Horizontal gene transfer (HGT) is the transmission of genes between organisms by other means than parental to offspring inheritance. While it is prevalent in prokaryote...2257 days ago
SciLifeLab tutorial for bioinformatics analysis !
SciLifeLab is a national center for molecular biosciences with focus on health and environmental research. Courses Old...November - UppsalaRNAseq tutorials R Programming Foundations for Life Scientists 2016 November - Upps...2221 days ago
RestrictionDigest: A powerful Perl module for simulating genomic restriction digests
RestrictionDigest can simulate the reference genome digestion and generate comp...re information, please see the academic paper published online (http://www.sciencedirect.com/science/article/pii/S071734581630001X...2165 days ago
SOAP2 : Short Oligonucleotide Analysis Package 2
SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Package)....) are developed by the algorithms research group of the Department of Computer Science, the University of Hong Kong...2185 days ago
RNA-seq Analysis Workshop Course Materials
RNAseq can be roughly divided into two "types": Reference genome-based - an asse...using de novo approaches. This type of RNAseq is as much of an art as well as science because assembly is heavily p...2144 days ago
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