Results for "Key"
Bio-Scripts
Perl script introduces control structures, arrays and hashes.
...=> 'AUGC', 'Number of seqs' => 2 ); print $sequence{'DNA'}, "\n"; # Control Loop: foreach foreach my $key (sort (keys %sequence)) { print "Ke...2862 days ago
- ...{xpos} = $i; }elsif ($i == $j){ $DOT{xpos} = $i; $key = substr($seq, 0, $word); #treat Ns as mismatches unless ($key =~ m/N/){ if ($DOT{$...
2693 days ago
Calculate ATGC percentage in parallel with perl
...seqio->next_seq) { my $id = $seqobj->display_id; # there's your key my $seq = $seqobj->seq;...e $sequences{$id} = $seq; } my $max_procs = 5; my @names = keys %sequences; # hash to r...2656 days ago
Clump Finding Problem Solved with Perl
...; for (my $aa=0; $aa $max) { $max = $km;} #print "$km\t$myStr\n"; $myHash{$myStr}=$km; } #Print all key which have matching values foreach my $name (keys %myHash){ print "$name...2334 days ago
Perl script to read multi fasta sequence one by one
...#USAGE #perl rohanRun.pl seq.fa my $outfile='tmp.fa'; my $fastaSeq_ref = readfasta ("$ARGV[0]"); my %fastaSeq = %$fastaSeq_ref; foreach my $key ( keys %fastaSeq) { open (OUT, ">$...2221 days ago
Perl script to convert GFF 2 FASTA !
#!/usr/bin/perl use strict; use warnings; use Bio::Seq; use Bio::SeqIO; use Bio::DB::Fasta; $| = 1; # Flush output my $outfile_cds = Bio::SeqIO->new( -for...2139 days ago
- ..._1.0-1_amd64.deb’ saved [1896270068/1896270068] $ sudo dpkg -i cuda-repo-ubuntu1804-10-2-local-10.2.89-440.33.01_1.0-1_amd64.deb $ sudo apt-key add /var/cuda-repo-10-2-local...
1554 days ago
Installing docker for Bioinformatics on Ubuntu !
...url -fsSL "https://download.docker.com/linux/ubuntu/gpg" | apt-key add -qq - >/dev/null Warning: apt-key output should not be parsed (...ficate file (default "/home/jit/.docker/cert.pem") --tlskey string Path to TLS key f...1514 days ago
Pack a perl program with their dependencies on Ubuntu !
...ld successfully on 14th April 2019. Official Question Paper & Answer key of DBT-BET 2019 Exam has...best part about the DBT-BET Exam is both the question paper & answer key is released... Biotechnol...1512 days ago
Commands to install conda in Ubuntu !
...e strong authentication for client/server applications by using secret-key cryptography. cryptography....1-py37_0 ... installing: ipython-7.4.0-py37h39e3cac_0 ... installing: keyring-18.0.0-py37_0 ... instal...1512 days ago
