Results for "Length"
Blogs
How to Prepare your Bioinformatics CV ?
...The font size should be no less than 12 point. Basic criteria - The basic criteria should be easily located, preferably on the first page. Length - The length of your CV increases as you p...3387 days ago
Various scholarships around the world !!
...ogram provides relevant and contemporary nephrology training to physicians.Award Details: The total sum of the grant is in alignment with the length of the training and varies ac...2831 days ago
- +12 more Blogs
Bookmarks
Bio related lectures from internationally renowned scientists!!!
...llection includes talks by many Nobel Laureates and members of the United States National Academy of Sciences. In 2013, we released our first full-length course in Light Microscopy an...3863 days ago
Alignment of closely related whole genomes/scaffolds
...he tree of life. This increasing volume of data requires tools that can quickly compare multiple whole-genome sequences, millions of base pairs in length, to aid in the study of popul...3033 days ago
- +51 more Bookmarks
Files
- ...ty is a mapping from randomness to the real number between 0 and 1. The similar examples are that the entropy measures the uncertanity; product of length and width measures the area o...
1628 days ago
- ...s/OPERA-LG_v2.0.6/bin//filter_conflicting_edge.pl pairedEdges_i0 contig_length.dat 100 2Illegal division by...ILE at bin/OPERA-long-read.pl line 250.rm anchor_contig_info.dat contig_length.dat filtered_edges.dat filter...
2165 days ago
Pages
A guide for complete R beginners :- Getting data into R
...ally useful if you have spaces in the contents of some columns, so R does not mess up reading the columns . However if the columns or of an uneven length it will tell you. If you kno...3371 days ago
Frequent words problem solution by Perl
...ATGCATGAGAGCT";my $kmer=4; my %myHash;my $max=0;for (my $aa=0; $aa<=(length($string)-4); $aa++) { &n...indowmy ($string, $myStr, $kmer)=@_;my $count=0;for (my $aa=0; $aa<=(length($string)-4); $aa++) { &n...3266 days ago
- +3 more Pages
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...om genome-wide ChIP data. Narlikar, Nucleic Acids Res 41:21–32, 2013 PubMed Transcriptome analysis Assembly and comparison to genome Full-length transcriptome assembly from R...3793 days ago
Perl one-liner for bioinformatician !!!
...t blank linesperl -pe '$_.="\n"x7' #7 space in a line.perl -ne 'print unless /^$/' #remove all blank linesperl -lne 'print if length($_) < 20' #print all lines with length less than 20.perl -00 -pe ''...3642 days ago
- +17 more Top-level pages
Wire posts
News
Illumina reveals first dataset of long reads
...help of Moleculo technology , acquired by Illumina releases new service for long reads sequencing i.e., FastTrack Long Reads. Average read length is around 8,500 base pai...3922 days ago
- ...ctions to in science. It even suggesting a fourth domain of life. The new visrus are about one micron—a thousandth of a millimeter—in length, the newfound genus Pandoravi...
3904 days ago
- +4 more News
Opportunity posts
- ...art of an academic year) and the quality mark of courses in chemistry and physics are of particular interest. The title, number of credits and the length in full-time months of underg...
3911 days ago
Staff Scientists at National Institute of Plant Genome Research, New Delhi
...cture, Plant Immunity, Molecular Breeding, Transgenics for crop improvement and other emerging areas based on plant genomics. Remuneration: The length of experience and scientific...3179 days ago
Fun
Perl Poem: Parse it in both Perl and English!
...-beg-you, close them, yet. accept (yourself, changes),bind (grief, despair); require truth, goodness if-you-will, each moment; select (always), length(of-days) # listen (a perl po...3933 days ago
Video
- ...arge networks. The theoretical discussion is accompanied by examples of well-studied model systems. Prof. Uri Alon, Weizmann Institute of Science (length 1.5 hours)
3819 days ago
Happy Independence Day 2014 || Independence Day Special Video
...Like Our Facebook Page www.facebook.com/TamilSuperHits For more full length tamil movies http...aylist?list=PL0D7D96AC36B5C1EC&feature=view_all To Watch More Full Length Tamil Movies http://www.youtu...3565 days ago
- +1 more Video
Bio-Scripts
- ...ncatenate two strings my $modifiedDNA = $DNA.$polyA; #calculate the length of $modifiedDNA and #print out the value of the variable and its length my $DNAlength = length($modi...
2931 days ago
Count the frequency of base G in a given DNA sequence
...se warnings; my $DNA = "GATTACACAT"; #initialize $countG and $currentPos my $countG = 0; my $currentPos = 0; #calculate the length of $DNA my $DNAlength = length($DNA); #for each...2931 days ago
- +69 more Bio-Scripts
Tags
Quick way to calculate length of multiple fasta file!!
I am using this perl code right nowadays.#!/usr/bin/perl use warnings; use strict;open(FASTA, "<", seq.fa) or die("Can't open\n"); my %singleLineSequences; my $sequence_id; while(){ my $line = $_; chomp($line); if ($line =~ m/^>(\S+)/){ $sequence_id = $1; $s...Tags: Fasta, Size, Length, NGS, Sequence
2880 days ago
- +4 more Tags
Comments
Comment on "Short-read assembly using Spades !"
...s using a text editor or a genome browser. SPAdes also provides several options for tuning the assembly parameters, such as adjusting the k-mer length or enabling error correction....435 days ago
Comment on "CovCal: Coverage / Read Count Calculator"
...are simulating datasets. The coverage equation is defined as follows. C = LN / G C is the sequencing coverage G is the length of the genome L is the read length N is the number of reads...597 days ago
- +11 more Comments
