Comment on "Benchmarking Perl Module !"
...previous versions of your own module. You can also use other functions from the Benchmark module, such as cmpthese, to compare the performance of multiple modules or subroutines....426 days ago
Comment on "Tools for Sequence translation !"
...ing protein sequence. It supports several genetic codes and can handle multiple sequences at once. EMBOS...sequence translation. It supports several genetic codes and can handle multiple sequences at once. CLC S...431 days ago
Comment on "Calling variants in non-diploid systems"
...d for calling variants in pooled samples where the number of samples is not known. This is the exact scenario we have here: in our sample we have multiple mitochondrial (or bacterial o...1054 days ago
1112 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://pubmed.ncbi.nlm.nih.gov/32463100/1255 days ago
Comment on "Sibelia: A comparative genomics tool"
...amples/Sibelia" dir were taken from [5, 6]. Note that you can specify multiple FASTA files, just separate th...ges ----------------------------- "Sibelia" performs computations in multiple stages. Every stage produces...1295 days ago
Comment on "Mugsy: multiple whole genome alignment tool"
...). Header lines in the FASTA files should not contain ':' or '-' to avoid parsing problems. View or parse MAF output The output of Mugsy is Multiple Alignment Format (MAF).One op...1296 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny is the latest input in computational synteny halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https:/...1441 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant calls and regions:We developed an integration pipeline to utilize sequencing data generated by multiple technologies to generate variant calls...1570 days ago
2110 days ago