Results for "Markov Chain Exploration"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install sever...g cpan:# perl -MCPAN -e 'install Bundle::BioPerl'(or)# cpancpan shell -- CPAN exploration and modules installation (v1....3950 days ago
Computer simulation of genetic mechanism !!
Computer simulation is the discipline of designing a model of an actual or theoretical...size three of the more important: (1) they enable explo...g/src/contrib/archive/kernelpop/ MaCS Markovian Coalescent Simulator http://www...2975 days ago
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Bookmarks
- Orange Bioinformatics extends Orange, a data mining software package, with common f...le factors. All features can be combined with powerful visualization, network exploration and data mining techniques fr...
3499 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
In recent years, computational biology and medical informatics have seen significan..., Computational approaches to analysis of large scale Mass spectrometry data, Exploration and visualization of proteomi...3499 days ago
- +21 more Bookmarks
Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical me...embrane-spanning proteins. It is based on a first order Marko...part. The closed association between the biological and Markov stat...3945 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for ea...ng non-homogenous models),Tools for manipulating Hidden Marko...H. Ancestral population genomics: the coalescent hidden Markov mode...3948 days ago
Awesome perl frameworks, libraries and software - PART 3
fujiwara/perl-queue-q4pg-lite - simple message queue using Postgre...butions using Bayesian inference and Markov chain with perl and PDL dagolden/F...eck.JS presentation to PDF Perl-Toolchain-Gang/Sub-Uplevel - (Perl...ramework for html-to-pdf/(e)book toolchain happi...2495 days ago
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Top-level pages
- "Bioinformatics is a science of biological predictions and analysis" -- Jitendra Naray.... Multiple sequence alignments are useful for building sequence profiles or Hidden Markov Mode...
3948 days ago
- Data mining, the extraction of hidden predictive information from large databases. Data...on into a land of support vector machines, hidden marko...ioinformatics: http://www.acm.org/sigs/sigkdd/explorations/issue4-2/zaki.pdf Bioinform...
3947 days ago
- +12 more Top-level pages
Wire posts
News
- "In recently published paper (entitled "Microbial Production of Short-chain Alkanes") in Nature journal on September 29...hetic pathway for the biosynthesis of short-chain alkanes. This allowed the dev...ied to produce other products such as short-chain fatty...
3870 days ago
BEReX : Biomedical Entity-Relation eXplorer
BEReX is a new biomedical knowledge integration, search, and exploration tool. BEReX integrates eight popular databases (STRING, DrugBank, KEGG, PharmGKB, BioGRID, GO, HPRD, and MSigDB) and delineates...3840 days ago
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Opportunity posts
In need of Computing Resources???
Hi, C-DAC (Centre for Development of Advanced Computing) has initiated GARUDA grid (http://garudaindi...a special initiative, C-DAC is collaborating with European project, CHAIN-REDS (http://science-gateway.chain-proje...3491 days ago
RA WALK-IN-INTERVIEW @ NBFGR, Lucknow
F.No. 1(122)/2015-Admn. (CABin Project) Research Associate/Young Professional/SRF...ics and Computer skills. NET qualified Note: The project involves extensive exploration tours and sampling from water...3358 days ago
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ResearchLabs posts
- The human genome project and similar projects in disease-causing organisms such as Plasmodi...ional comparative genomics Sensitive genomic sequence search techniques using hidden Markov mode...
3948 days ago
- In a lot of my work in bioinformatics, I have been using hidden Markov models (HMMs). As a postdoc with David Haussler at UCSC we developed the so-called profile HMMs (refs). Since then I...
3870 days ago
Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.......er. Har Ligand jo dock karega. Alignment to hona hi tha. Mera sequence mera base. Markov aapk...3919 days ago
Video
- To purchase this program please visit http://www.greatpacificmedia.com/ Segment from the program Biotechnology:...s insertion of genes into genomes, and the production of genes via polymerase chain react...
3804 days ago
- Transcription is the process by which the information in DNA is copied into messenger RNA (mRNA) for protein prod...h its intake hole and they are joined together to form the long messenger RNA chain snaki...
3384 days ago
Bio-Scripts
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the reference multifasta file name here...2141 days ago
Identify genome-wide synteny with LASTZ alignment
#This is the walkstrough how to identifiy genome-wide synteny markers bas...t Step2: Alignment using LASTZ and Chain/Net lastz AAChr1.txt FFChr...0 T=1 --format=axt --out=chr01.axt axtChain -linearGap=medium chr01.axt A...t chr1.chain.filter.tnet.synnet chr01.chain.filte...518 days ago
Tags
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : The CG island is a stretch of DNA (usually longer than 200 bases) in which the frequency of the CG sequence is higher than other regions. It is also called the CpG island, where "p" simply indicates that "C" and "G"...Tags: Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration, Bioinformatics, Computational Biology, CpG island
3825 days ago
Comments
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with source-codes http://bioinformaticsonline.com/pages/view/6380/hidden-markov-models-viterbi-algorithm-markov-chain-exploration-with-script3824 days ago
