2168 days ago
2092 days ago
SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
...sembly procedure with read mapping for estimation of the abundances of genes in each metagenome Co-assembly of a large number of metagenomes via merging of individual metagenomes In...1351 days ago
1343 days ago
RagTag: a collection of software tools for scaffolding and improving modern genome assemblies
RagTag is a collection of software tools for scaffolding and improving modern genome assemblies. Tasks include: Homology-based misassembly correction Homology-based assembly scaffolding and patching Scaffold merging962 days ago
796 days ago
JASMINE: Jointly Accurate Sv Merging with Intersample Network Edges
...ine represents the set of all SVs across samples as a network, and uses a modified minimum spanning forest algorithm to determine the best way of merging the variants such that each m...667 days ago