Comment on "Benchmarking Perl Module !"
...previous versions of your own module. You can also use other functions from the Benchmark module, such as cmpthese, to compare the performance of multiple modules or subroutines....430 days ago
Comment on "Tools for Sequence translation !"
...ing protein sequence. It supports several genetic codes and can handle multiple sequences at once. EMBOS...sequence translation. It supports several genetic codes and can handle multiple sequences at once. CLC S...435 days ago
Comment on "Calling variants in non-diploid systems"
...d for calling variants in pooled samples where the number of samples is not known. This is the exact scenario we have here: in our sample we have multiple mitochondrial (or bacterial o...1058 days ago
1116 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://pubmed.ncbi.nlm.nih.gov/32463100/1259 days ago
Comment on "Sibelia: A comparative genomics tool"
...amples/Sibelia" dir were taken from [5, 6]. Note that you can specify multiple FASTA files, just separate th...ges ----------------------------- "Sibelia" performs computations in multiple stages. Every stage produces...1300 days ago
Comment on "Mugsy: multiple whole genome alignment tool"
...). Header lines in the FASTA files should not contain ':' or '-' to avoid parsing problems. View or parse MAF output The output of Mugsy is Multiple Alignment Format (MAF).One op...1300 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny is the latest input in computational synteny halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https:/...1445 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant calls and regions:We developed an integration pipeline to utilize sequencing data generated by multiple technologies to generate variant calls...1575 days ago
2114 days ago