Results for "NT"
Users
About me: ...mainly focus on chromosomal breakpoint and amniotes evolution. I (We...algorithms to harness the huge amount of biological data (genomes,...f NGS and epigenomic data, but currently we (our group and my superv...k/portal/en/theses/computational-identification-and-analysis-of-evol...Interests: Chromosomal Breakpoints8 days ago
- About me: I am a computational biologist and currently working on system biology.
3915 days ago
- +86 more Users
Blogs
Five unique traits of effective computational biologist
...se they lack the other important traits needed. Here are top f...ear before because it looked interesting; and the great biolog...I highly recommend your to interact with biotech researchers...defend your finding with scientific words. Thanks to all of...3948 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...ocate XML/parser.pm in @INC (@INC contains:/usr/lib/perl5/5.10.0/i38...or server is not connected to the Internet. Download Perl module:...ically, Perl modules will be dependent on several other modules. Jus...below. I have shown only the important configuration parameters belo...3948 days ago
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Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3943 days ago
- ...omputationally. I found this online bioinformatics courses really interesting where they are covering the common algorithms underlying the following fundamental topics in bioinformatics: a...
3943 days ago
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Files
- In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.
3950 days ago
Bioinformatics approach to Boar Taint
...genetic trait called boar taint.Androstenone and Skatole ...e fat primarily cause boar taint. Metabolism of androstenone a...al solution to remove boar taint but it also results in bad qu...ssembly using Bowtie2. Alignment file then used for calling SN...3787 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
...r there might not be one specific language but a few that lend themselves best to Bio-informatics work that is math heavy and deals with a large amount of data.3950 days ago
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3942 days ago
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Pages
Bio++ : C Language libraries for your biological need
...s in his paper, "The Development of the C Language",C is quirk...in a wide variety of environments. C++ has its basis in C - e...d in an extensible object-oriented way, in the C++ language....e format to deal with codominant markers and bio-sequence data...3945 days ago
- ...ve, general purpose object-oriented programming language that combines syntax inspired by Perl with Small...cluding functional, object oriented, imperative and reflective....or upcoming alternative implementations of the Ruby language, i...s.org/wiki/Cookbook:Table_of_Contents Ruby Programming Challen...
3945 days ago
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Top-level pages
- ...erned." - from the National Center for Biotechnology Informati...enetic code, but also experimental results from various source...ank. Sequence data are prominent, but also other data are stor...rane proteins are underrepresented in the PDB structure databa...
3945 days ago
- ...art of the modern DNA sequencing era which resulted in further invention, improved development toward new advanced strategie...yse and explore the hidden information. This tutorial is aimed to introduce you new biological prog...
3946 days ago
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Wire posts
News
- The ongoing genomic research in USA contributed $31 billion to the U.S. gross national product and helped support 152,000 jobs. Reference: http://www.unitedformedicalresearch.com/wp-content/uploads/2013/06/The-Impact-of-Genomics-on-the-US-Economy.pdf
3950 days ago
- ...members from the R community: useR! - providing a forum to the R user community - and DSC - a platform for developers of statistical software. Recently useR! conference have been...
3950 days ago
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Opportunity posts
- ...sed Software Infrastructures for continuous-context-sensitive Systems” offers...mme will start on October 1, 2013 until 30.09.2016. The period of e...de their research, an individual mentoring and qualification approa...two referees, transcipts of documents summarizing their academic p...
3946 days ago
- ...(H.P.)-176 061 Advertisement NO.14/2013 Applications/Bi...he duration of the projects. Interested and eligible candidate...- P.M. (consolidated). Essential Qualifications: Ph.D. in B...experience in the area of plant virology/fungal pathology/pla...
3942 days ago
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ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...ately predict links, such as specific molecular interactions, in eukaryotic cell...genome sequence and transcript profiles. We are interested to find how these link...nalysis software. Predicting biologically relevant protein interactions Cellula...3946 days ago
- ...CC6803) and yeasts (mainly Saccharomyces cerevisae) to environmental stresses triggered by oxidative agents, heavy metals, or drastic ch...a wealth of experimental data, which are processed, archived, integrated and represented as wor...
3917 days ago
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Fun
Bioinformatician become producer/director !!!
...enge Raju ban gaya Genefinder. Har Ligand jo dock karega. Alignment to hona hi tha. Mera sequenc...ogram Tak Haan Maine Bhi ClustalW Kiya Hai GeneScan Karke Dekho Alignment Apna Sequence Parayi *Warn...3916 days ago
Perl Poem: Parse it in both Perl and English!
...e a few Perl poems, as well as a paper on Perl poetry that she presented at the Usenix Winter 1992 Technical Conference,...stressed; @dawn, dance;@evening, sing;read (books,$poems,stories) until peaceful;study if able; wr...3916 days ago
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Video
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3902 days ago
Influenza animation - flu virus mechanism
Animation of the mechanism of an influenza virus and how Crucell's antibodies target the HA1 proteins on the virus and prevent further spread of influenza. Client: Crucell Direction, Design & Animation: Dani...3850 days ago
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Bio-Scripts
Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows installation First: Download ftp://ftp.ncbi.nlm.nih.gov/blast/executa...1145 days ago
- ...ifiedDNA = $DNA.$polyA; #calculate the length of $modifiedDNA and #print out the value of the variable and its length my $DNAlength = length($modifiedDNA); print "Modified DNA: $modifiedDNA h...
2915 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
...h is compatible with most bioinformatics tools or software. I basically want to do de-novo assembly, map r.... Recommendations welcomed. Which languages would you recommend to a student wishing to enter the world of...3528 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3524 days ago
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Tryst
Interview with a bioinformatician series ...
The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. Hopefully these answers will prove useful to...3415 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...ute at TUBITAK MAM Research Center. His research interest revolves around the canc...th a Bioinformatician” interview series ... What pu...What was your greatest scientific disappointment in life ti...rmatics is a field that constantly and dynamically changes. As...2360 days ago
Groups
...th bioinformatics as a field of study, is at an interesting crossroads. As an aca...rmatics as a money-making proposition has different criteria for success, and it...oinformatics business ideas. Your ideas and comments are welcome.3951 days ago
INTIMATE secrets hidden in your DNA could be stolen with...omprehensive scan of your genome, revealing DNA variants that help determine your sus...tational biologist or bioinformatician you hack the entire genome to understand the g...3951 days ago
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Tags
Comments
Comment on "Benchmarking Perl Module !"
...his program should take the form of a subroutine that runs the code you want to benchmark. Here's an examp...hmark module to run the benchmark. The timethese function takes two arguments: the number of iterations to...413 days ago
Comment on "A quick guide to Phred scaling"
...is a widely used system for representing the quality scores of sequencing reads. It is used to quantify the probability of an erro...es: Phred quality scores are represented as integers ranging from 0...reads. Each quality score is represented as an ASCII character, with...413 days ago
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