Results for "Open Source"

Bio-Scripts

  • Install Samtools, Bcftools and htslib on Ubuntu !

    #Inspired from online search sudo apt-get update sudo apt-get install gcc sudo ap...rt PATH="$PATH:/usr/bin/samtools-1.9" export PATH="$PATH:/usr/bin/htslib-1.9" source ~/.profile echo "All done"

    1570 days ago

  • Bash commandline to install Anaconda !

    #The line begins with $ are the commands $ mkdir tmp $ cd t...1.23-0 ... installing: intel-openmp-2019.3-199 ... installing:...1-he6710b0_1 ... installing: openssl-1.1.1b-h7b6447c_1 ... ins...k-3.4-py37_1 ... installing: openpyxl-2.6.1-py37_1 ... install...to take effect, close and re-open y...

    1567 days ago

  • Bash command to install Miniconda !

    (base) [wsu29@bladeamd-2 tmp]$ wget https://repo.anaconda.com/miniconda/M...- ncurses==6.1=he6710b0_1 - openssl==1.1.1d=h7b6447c_3 -...- pycparser==2.19=py37_0 - pyopenssl==19.0.0=py37_0 - pyso...r changes to take effect, close and re-open y...

    1567 days ago

  • Installing ggplot2 and its dependencies on Ubuntu !

    jit@jit-HP-Pro-3335-MT:~/Downloads...oaded 3.1 MB * installing *source* package ‘glue’ ... ** packa...curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glue.c -o glue.o gc...curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stri_container_utf16....curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_rep...

    1562 days ago

  • Circos with circosJS

    let width = $(wi...ecember"}, ]; let layout_data2 = [ { source: { id: 'january', start: 1, e...target: { id: 'april', start: 18, end: 20 }}, { source: { id: 'february', start: 20,...

    1536 days ago

  • Install conda on remote server !

    Please take a look at the Anaconda repo archive page https://repo.continuum.io/archi...echo 'export PATH="~/anaconda/bin:$PATH"' >> ~/.bashrc # Refresh basically source .bashrc conda update conda

    1532 days ago

  • Commands to install conda in Ubuntu !

    ...naconda Distribution contains open source software packages from third...relate to cryptogr aphy: openssl The OpenSSL Project is...rade, full-featured, and Open Source toolkit implementing the Tran...k-3.4-py37_1 ... installing: openpyxl-2.6.1-py37_1 ... installin...

    1523 days ago

  • Check os version in Linux !

    The procedure to find os name and version on Linux: #Open the terminal application (bash shell) #For remote server login using the ssh: ssh user@server-name #Type any one of th...

    1519 days ago

  • Setting up autoConTAMPR !

    (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 ---...

    1454 days ago

  • Install SibeliaZ in your Linux cluster !

    ...t_repodata.json, will retry with next repodata source. Collecting package metada...he1b5a44_0 61 KB bioconda openssl-1.1.1i |...main/noarch::certifi-2020.6.20-pyhd3eb1b0_3 openssl...

    1244 days ago