Install Samtools, Bcftools and htslib on Ubuntu !
#Inspired from online search sudo apt-get update sudo apt-get install gcc sudo ap...rt PATH="$PATH:/usr/bin/samtools-1.9" export PATH="$PATH:/usr/bin/htslib-1.9" source ~/.profile echo "All done"1570 days ago
Bash commandline to install Anaconda !
#The line begins with $ are the commands $ mkdir tmp $ cd t...1.23-0 ... installing: intel-openmp-2019.3-199 ... installing:...1-he6710b0_1 ... installing: openssl-1.1.1b-h7b6447c_1 ... ins...k-3.4-py37_1 ... installing: openpyxl-2.6.1-py37_1 ... install...to take effect, close and re-open y...1567 days ago
Bash command to install Miniconda !
(base) [wsu29@bladeamd-2 tmp]$ wget https://repo.anaconda.com/miniconda/M...- ncurses==6.1=he6710b0_1 - openssl==1.1.1d=h7b6447c_3 -...- pycparser==2.19=py37_0 - pyopenssl==19.0.0=py37_0 - pyso...r changes to take effect, close and re-open y...1567 days ago
Installing ggplot2 and its dependencies on Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads...oaded 3.1 MB * installing *source* package ‘glue’ ... ** packa...curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glue.c -o glue.o gc...curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stri_container_utf16....curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_rep...1562 days ago
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Install conda on remote server !
Please take a look at the Anaconda repo archive page https://repo.continuum.io/archi...echo 'export PATH="~/anaconda/bin:$PATH"' >> ~/.bashrc # Refresh basically source .bashrc conda update conda1532 days ago
Commands to install conda in Ubuntu !
...naconda Distribution contains open source software packages from third...relate to cryptogr aphy: openssl The OpenSSL Project is...rade, full-featured, and Open Source toolkit implementing the Tran...k-3.4-py37_1 ... installing: openpyxl-2.6.1-py37_1 ... installin...1523 days ago
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Install SibeliaZ in your Linux cluster !
...t_repodata.json, will retry with next repodata source. Collecting package metada...he1b5a44_0 61 KB bioconda openssl-1.1.1i |...main/noarch::certifi-2020.6.20-pyhd3eb1b0_3 openssl...1244 days ago