Results for "Optimal"
Blogs
Structural variation: the hidden genomic treasure
...nted. Tools CNVnatora tool for CNV discovery and genotyping from depth of read mapping.2011a,2011b AGEa tools that implements an algorithm for optimal alignment of sequences with S...2695 days ago
Frequently used bioinformatics tools for viral genome analysis !
...Keane JA, Kellam P, Otto TD. Bioinformatics. 2015 Jul 15;31(14):2374-6. doi: 10.1093/bioinformatics/btv120. Epub 2015 Feb 28. Adapter sequences: Optimal enzymes for amplifying sequen...1039 days ago
Bookmarks
InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
...e genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs, allele-specific CNAs, and haplotype information to identify the optimal breakpoint graph representing...1088 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_assembly). It uses information from paired-end/mate-pair/lon...2787 days ago
- +15 more Bookmarks
Pages
Genome Assembly Tools and Software - PART2 !!
...enome Sequence DatahapAssembly beats the previous best for the important Haplotype Assembly Problem. It is an approach to finding optimal solutions for the haplotype a...2678 days ago
Awesome perl frameworks, libraries and software - PART 3
...kaccha/nodebrew - Node.js version manager pasky/speedread - A simple terminal-based open source Spritz-alike (per-word RSVP aligned on optimal reading points) plack/Plack&...2486 days ago
Top-level pages
- ...uages have been developed to facilitate this task (such as the Sequence Retrieval System (SRS) and the Entrez system). An unsolved problem is the optimal design of inter–operati...
3939 days ago
- ...path in a weighted graph can be found by using the shortest path to the goal from all adjacent vertices. When the optimal solution to a problem can be constructed from optimal solutions to subproblems, usi...
3938 days ago
- +4 more Top-level pages
News
- ...mobile devices, given the fact that some studies require extracting 10 mililiters of blood. Illumina researchers are also working on finding the optimal technology for this on-chip D...
3405 days ago
Phased Human Genome Assembly !
...ty, Most Contiguous Individual Human Genome Assembly to Date Blog post: For Reference-Grade Human Genome Assemblies, SMRT Sequencing Yields Optimal Results Webinar: Assem...2028 days ago
Opportunity posts
- ...roject entitled: "Positive and negative impacts of macromolecular crowding agents during target site location by DNA binding proteins – origin of optimal search at physiological ionic...
2844 days ago
Bio-Scripts
- ...ead pairs FilterLongReadAlignmentsSAMSpark (EXPERIMENTAL Tool) Examines alignments of chimeric contigs, attempting to produce an optimal tiling FlagStat...
2067 days ago
- ...ero for the real size) [Real] default = 0 -K Number of best hits from a region to keep [Integer] default = 0 -s Compute locally optimal Smith-Waterman alignments [T/...
942 days ago
