Results for "Packages"
Users
About me: ...up contributed/maintained number of web sites that include i) CRDD, ii) OSCADD, iii) OSDDlinux, iv) CSIR Informatics Portal, v) GENESIS, vi) GPSR Packages, vii) OSDDchem, viii)Sysborg2...3490 days ago
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...sp; tedious and annoying process. Some of the packages like GD is the real pain. How...oad size: 1.0 MIs this ok [y/N]: yDownloading Packages:(1/5): perl-ExtUtils-ParseXS-...same approach to install all the modules, and packages if required. Thanks for read...3946 days ago
Five unique traits of effective computational biologist
...ood biological programmer learned it a year before because it looked interesting; and the great biological programmer also read about the BioPerl packages, genomics, DNA string, genomi...3946 days ago
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Bookmarks
Bioinformatics software for biologists in the genomics era
...be sensitive to the reality that comparatively small teams of biologists have historically developed some of the most popular biological software packages in molecular evolutionary ana...3782 days ago
Orione – a web-based framework for NGS analysis in microbiology
...caffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the construction of computational pipelines that use different software packages is difficult due to a lack of...3570 days ago
- +45 more Bookmarks
Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
...atics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had a lot of powerful...3947 days ago
What are the difference between BioRuby and BioGem?
I came across two diferent but matching term BioRuby and BioGem. What are the difference between these two term? If both are using same Ruby language for development then why did they develope two different biological packages.3910 days ago
Pages
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby pr...3943 days ago
A guide for complete R beginners :- Installing R packages
...last few years, the number of packages has grown exponentially! Thi...on how to actually install R packages. Let’s suppose you want...ad the package. Installing packages without root access First, y...nd add the line R_LIBS=/data/Rpackages/ to it. This means that whene...3353 days ago
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Top-level pages
- ...g a script to analyse and explore the hidden information. This tutorial is aimed to introduce you new biological programming languages with their packages/libraries, and assist in your...
3943 days ago
- ...graphs. If you’re serious about data mining though, you’ll need something more heavy weight. I use R, free, and with good data mining packages such as vegan and labdsv. For...
3942 days ago
- +13 more Top-level pages
Wire posts
News
RNA-Seq Data Pathway and Gene-set Analysis Workflows
...)/ Bioconductor(2.13) to use all the features. Reference: Please check it out:http://bioconductor.org/packages/release/bioc/html/gage.htmlhttp://bioconductor.org/packages/release/bioc/vignettes/gage/i...3829 days ago
Update Genome Workbench 2.7.15 released
...Inspector. New View should offer an improved selection context examination. See Using Active Objects Inspector tutorial for more details. Binary packages for Linux OpenSUSE 13.1 are n...3716 days ago
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Opportunity posts
Senior Bioinformatics Programmer and SRF at BIOTECH PARK Lucknow
...; database searching. b) Essential Qualification Expertise in windows, Microsoft excel. c) Desirable Good knowledge of statistical software packages like SPSS. d) Age Below 35...3904 days ago
- ...ific research in the area of Drug Design including Bio-molecular modeling and simulation studies, QSAR, Virtual screening, pharmacophore modeling packages like SYBYL/ACCELRYS etc. Fami...
3836 days ago
- +8 more Opportunity posts
Bio-Scripts
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1212 days ago
Install NCBI entrez-direct and esearch using conda !
...vironment: done ==> WARNING: A newer version of conda exists. 13.9-pl5262he881be0_2 Proceed ([y]/n)? y Downloading and Extracting Packages entrez-direct-13.9 | 5.2 M...1097 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...hput experimental data in an integrated manner and besides lots of the packages it provides, it is open sourc...ng the process by only looking the output(s) of the employed pipelines/packages/tools.2357 days ago
Groups
...software and data analysis. R's popularity has increased substantially in recent years with the availability of huge genomic data and biological packages. Bioconductor provides tools...3946 days ago
Tags
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced environment for efficient sequence management and analysis in R. It contains many speed and memory effective string con...Tags: Bioinformatics, Computational Biology, NGS, R, Bioconductor, Packages, Modules, Next generation sequencing
3620 days ago
Comments
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...it should install things into your conda-directory. When you install packages via cpan it will also print t...ge into. If you want to be extra-sure, you can also install most Perl packages via conda. Replace the ':' by...411 days ago
Comment on "Elgg Installation steps !"
If you need to uninstall all MySQL packages sudo apt-get remove --purge mysql* sudo apt-get autoremove sudo apt-get autoclean421 days ago
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