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1291 days ago
List of bioinformatics workflow management tools !
...scripting language for working with big data pipelines in computer systems of differ...ine stages and linking them together to make pipelines. [ web ] Common Wo...hat simplifies writing parallel and scalable pipelines in a portable manner. [ ...1137 days ago
The 5 reasons to mistakes at bioinformatics work !!!
...can halt your entire project for months. Compilation and running the pipelines in tedious because almost all...same kind of problem with Evolver :( … 4.Folders missing: The pipelines generate lots of data, and we...2101 days ago
Next Generation Sequencing (NGS) Tutorials
...eration sequencing http://hmg.oxfordjournals.org/content/19/R2/R227.full.pdf ============================================== NGS data analysis pipelines Detecting and annotating g...3482 days ago
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List of generic simulation software/tools/resource with brief description and homepage !!!
.../webdav.tuebingen.mpg.de/ffpopsim/FLUX SIMULATOR The Flux Simulator aims at providing a deterministic in silico reproduction of the experimental pipelines for RNA-Seq, employing a mini...3732 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...erforms variant calling an average of 3 times faster than alternative pipelines Annotates genomic data with...nt calling Allows users to create, save, share, or download analysis pipelines for automated and repeatable...2903 days ago
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Structural polymorphism analysis from NGS data
...repetitiveness of complex genomes. The tools will be integrated into pipelines and made available to end-use...ental designs in order to ensure compliance of produced datasets with pipelines requirements. He/she will be...3943 days ago
Special Project Scientist – Sorghum Genomics
...nguages and emerging and evolving software platforms relevant to bioinformatics and computational biology; ability to create new analytical pipelines; experience with handling lar...3633 days ago
Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
...the earliest studies developing and applying linkage disequilibrium methods as genetic mapping tools. The laboratory also developed methods and pipelines to generate and apply genome-...3865 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...have a good biological background in their field to tell if anything when wrong during the process by only looking the output(s) of the employed pipelines/packages/tools. ...2356 days ago
Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipelineTags: Bioinformatics, Computational Biology, Toolkit, Pipelines, Tools
2952 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing stages - known as 'pipelines'. January 20th, 2016 - New! Bpipe 0.9.9 released! Download latest, all Documentation Mailing List (Google Group) Bpipe has been published in Bioinformatics! I...Tags: Bioinformatics, Bpipe, Tool, Manage, Bioinformatics, Pipelines
2900 days ago
Comment on "Nextflow: Data-driven computational pipelines"
A Review of Scalable Bioinformatics Pipelines by Bjørn Fjukstad & Lars Ailo Bongo https://link.springer.com/article/10.1007/s41019-017-0047-z1531 days ago
Comment on "Nextflow: Data-driven computational pipelines"
A collection of high quality Nextflow pipelines https://github.com/nf-core/1531 days ago