Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a colle...id in identifying uncharacterized genes, putative regulatory elements and novel structural...for the study of evolutionary changes of genomic regula...2610 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biological phrases to specific gene...ignificant Gene Ontology (GO) terms, KEGG and REACTOME pathways, and TRANSFAC motifs to a user-specified group of...3710 days ago
Integrative RNA and ChIP-Seq analysis of regulatory T-cells
Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application note describes how integrated multi-omics functionality in Strand NGS was used to find the regula...3197 days ago
Integrated mRNA and microRNA transcriptome analysis in Strand NGS
Using a nasopharyngeal carcinoma case study, this paper highlights the integrated transcriptome analysis capabilities...nd NGS demonstrating the identification of miRNA – mRNA interactions in regula...3197 days ago
Popular bioinformatics educational resources !
Followings are the list of popular bioinformatics educational resources Bii.a-star.edu.sg Bio research and developme...Biinoida.blogspot.com Blog focusing on bioinformatics, biotechnology, pharma regula...2193 days ago
List of motif discovery tools !
...system for conserved sequence motifs Use this web-based sequence...ILIMOT -- discovery of linear motifs in proteins Predict short li...(and DNA) domains, patterns, motifs, protein families, and functi...pattern database for protein motifs. PRIDB -- Protein-RNA In...1993 days ago
List of comparative genomics resources !
3D-GENOMICS -- A Database to Compare Structural and Functional Annotations...CORG -- A database for COmparative Regulatory Genomics Delineate conserved...ne models and identify putative cis-regulatory regions of RefSeq Gene Orthol...tabase of genome-wide mammalian cis-regula...677 days ago
Chromosome breakpoint - a breakup to remember
Chromosome breakpoint refers to the physical location where a chromoso...f they disrupt the function of essential genes or regulatory elements. Deletions and dupl...abnormalities if they involve essential genes or regula...425 days ago