Results for "Structural Bioinformatics"
Blogs
Run bash script in Perl program !
BioPerl is a compilation of Perl modules that can be used to build bioinformatics-related Perl scripts. It is u.... IPC::Open2 More at https://bioinformaticsonline.com/snippets/view/42919...on: a2p More help at https://bioinformaticsonline.com/snippets/view/42920...638 days ago
Ancient whole genome duplication (WGD) detection tools !
There are two methods for ancient WGD detect...hiyang2 012/WGDdetectorhttps://bmcbioinformatics.biomedcentral.com/articles/10...// github.com/arzwa/wgdhttps://bmcbioinformatics.biomedcentral.com/articles/10..., you need to register at http:// bioinformatics.psb.ugent.be /webtools/i-adho...1156 days ago
Frequently used bioinformatics tools for viral genome analysis !
...Keane JA, Kellam P, Otto TD. Bioinformatics. 2015 Jul 15;31(14):2374-6. doi: 10.1093/bioinformatics/btv120. Epub 2015 Feb 28. Ad...z, A. & Grabowski, S. BMC Bioinformatics 14, 160 (2013). Kraken: Krak...t and SAMtools. Li, H. et al. Bioinformatics 25, 2078-9 (2009). Trimmomat...1048 days ago
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimming (fastp) Removal of host reads (Kraken 2; optional) Variant calling Read alignment (B...878 days ago
Useful Bioinformatics Analysis Tools !
...pression of FASTQ files, Bioinformatics, 2014; 30(15):2213&ndash...for raw sequencing data, Bioinformatics, 2018; 34(16):2748&ndash...ating k -mer statistics, Bioinformatics, 2017; 33(17):2759&ndash...of DNA sequencing data, Bioinformatics, 2019; 35(12):2043&ndash...864 days ago
List of comparative genomics resources !
...NOMICS -- A Database to Compare Structural and Functional Annotations of...ween Sequenced Genomes Compare structural and functional annotations of...duct genome wide functional and structural analysis. PReMod -- a da...Catfish Breeder and Researcher Bioinformatics Entry Location Find informat...678 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw This two minute video will change your mind on reproducible research 2. Parallel se...542 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence Repeats (SSRs), whic...from various organisms. These are just a few examples of the many bioinformatics tools available for exploring...426 days ago
Bioinformatics Tools for Phylogeny !
Direct access to the individual tools available on this server. Multiple Alignment:Phylogeny:Tree viewers:Utilities: MUSCLE PhyML TreeDyn Gblocks T-Coff...182 days ago
- Downloading 16S rRNA databases can be crucial for various bioinformatics analyses, especially in microbiome research. However, it's i...al Ecology): QIIME (https://qiime2.org/) is a widely used bioinformatics platform for microbiome analy...
12 days ago
- « Previous
- 1
- 2
- 3
- 4
- 5
- Next »
