Run bash script in Perl program !
...es that can be used to build bioinformatics-related Perl scripts. It is used, for example, in the development of source codes, standalone software/tools, and algorithms in bioinforma...634 days ago
Ancient whole genome duplication (WGD) detection tools !
...itcd wgdpip install .pip install git+https://github.com/arzwa/wgd.gitFor i-ADHoRe, you need to register at http:// bioinformatics.psb.ugent.be /webtools/i-adhore/licensing/Agree to t...1152 days ago
Frequently used bioinformatics tools for viral genome analysis !
...tation Transfer Tool. Otto, T. D., Dillon, G. P., Degrave, W. S. & Berriman, M. Nucleic Acids Res. 39, e57 (2011). SAMtools: The Sequence Alignment/Map format and SAMtools. Li, H. et al. Bioinformatics...1044 days ago
Illumina based assembly pipeline steps !
...ment (Bowtie 2) Sort and index alignments (SAMtools) Primer sequence removal (iV...ard; optional) Alignment-level QC (picard, SAMtools) Genome-wide and amplicon co...me) Intersect variants across callers (BCFTools) De novo assembly Primer...874 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • Kawulok, J., Deorowicz, S., CoMeta: Classification of Metagenomes Using...860 days ago
List of comparative genomics resources !
...gene set in different model organisms. Phylemon -- A suite of web tools for molecular evolution, phyl...a web server that integrates a selected suite of more than 20 different tools from the most popular stand-a...674 days ago
Tools for Sequence translation !
... https://github.com/betsig/borf CodAn - https://github.com/pedronachtigall/CodAn EMBOSS-Sixpack - https://www.ebi.ac.uk/Tools/st/emboss_sixpack/ esl-trans...541 days ago
541 days ago
Tools for Differential expression analysis
...://github.com/gangwug/MetaCycle RUVSeq - https://bioconductor.org/packages/release/bioc/html/RUVSeq.html SARTools - https://github.com/PF2-pasteur-fr/SARTools tximport - https:/...541 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence...just a few examples of the many bioinformatics tools available for exploring SSRs....nd research questions, you may find that other tools are more appropriate for your...421 days ago