Results for "UG"
Users
About me: ...logy, I mainly focus on chromosomal breakpoint and amniotes evolution. I (We) develop certain computational pipeline, and algorithms to harness the huge amount of biological data (g...8 days ago
- Contact email: sanahalsougrakpam@gmail.com
3744 days ago
- +27 more Users
Blogs
Five unique traits of effective computational biologist
...onal biologist, don't know what they are doing biologically. Even they struggle to explain their own progr...never getting a solution. Learn to perform root cause analysis, learn enough about the underlying system...3948 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...you can install any other Perl modules using CPAN. I know you are laughing, "to install a perl modul...# yum install perl-CPANOutput of yum install perl-CPAN command: Loaded plugins: refresh-packagekitupdates...3948 days ago
- +65 more Blogs
Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3943 days ago
Taverna Workflow Management System
...nt System – a suite of tools used to design and execute scientific workflows. Taverna has been created by the myGrid project and is funded through a range of organisations and...3913 days ago
- +238 more Bookmarks
Files
Bioinformatics approach to Boar Taint
...mple population for validation and then used for constructing SNPs haplotypes in close linkage disequilibrium with QTLs and fine mapping of QTLs through association mapping of genot...3787 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable kno...3943 days ago
- +4 more Files
Discussion topics
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3943 days ago
Pages
Bio++ : C Language libraries for your biological need
...or a system implementation language efficient enough to displace assembly languag...owed many C programmers to learn C++ quickly (though using C++ effectively requir...hod, but also methods using derivatives like conjugate gradient and Newton's meth...3945 days ago
Introduction to Bioinformatics
Bioinformatics (Genomics) Biocomputing in a Nutshell. Biologist's Guide to Internet Resources Computational Molecular Biology Course Course on Bioinformatics E...3919 days ago
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Top-level pages
- ...ions of bioinformatics are readily available through the world wide web, and are...in particular since errors propagate easily through links. Also databases of sc...approaches. Membrane proteins are interesting drug targets. It is estimated that...
3945 days ago
- ...oved development toward new advanced strategies of high-throughput DNA sequencing, so called the “high-throughput next generation sequencin...the analysis of vast production of sequencing database through advanced bioinformatics tool...
3946 days ago
- +58 more Top-level pages
Wire posts
News
Bioinformatics: Introduction to PERL
...course, attendees should be able to write simple Perl programs and to understand more complex Perl programs written by others. The course will be taught using the online Learning P...3949 days ago
- ...se for complete collections of gene phylogenies (phylomes). It allows users to interactively explore the evolutionary history of genes through the visualization of phyloge...
3917 days ago
- +94 more News
Opportunity posts
- ...Systemarchitektur, Prof. Dr.-Ing. Wolfgang Lehner, 01062 Dresden, Germany. Shortlisted candidates will be invited to Dresden in the middle of August to give a presentation on...
3946 days ago
Structural polymorphism analysis from NGS data
...r accommodating the high level of repetitiveness of complex genomes. The tools will be integrated into pipelines and made available to end-users through the Galaxy platform. The bio...3947 days ago
- +256 more Opportunity posts
ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...me sequence and transcript profiles. We are interested to find how these links are rewired by mutations to cause disease. This work is supported through the development of open-sour...3946 days ago
- ..., metabolomics and genetics) generate a wealth of experimental data, which are processed, archived, integrated and represented as working models through bioinformatics and mathemati...
3917 days ago
- +39 more ResearchLabs posts
Fun
Golden Rules of Bioinformatics
..., it will probably look right. Any simple problem can be insoluble if enough metting are held to discuss...a systematic method of comming to the wrong conclusion with confidence. Bug is a undocumented feature in...3914 days ago
- ...sponse -use warnings;for ($count=1; $count <=100; $count++) { print "It is in my gene!!!";}I guess, he is gonna to be a real biogeek. Nice try though. Smart kid. 2. In s...
3699 days ago
- +1 more Fun
Video
Daniel Reda - An Introduction to Biotechnology and Bioinformatics
Daniel Reda, co-Chair of the Biotechnology and Bioinformatics track at Singularity University, introduces the key concepts and breakthroughs in biotechnology and bioinformatics. Filmed during the November 2009 Executive Program at Singularity University.3915 days ago
Bioinformatics -- Understanding of living systems through information science
...nome. But the amount of information involved is huge, so recently, it's been read...rganism evolves, its genome sequence changes through sudden mutations. Additional...a Lab has decoded the natto bacillus genome, through analysis using Keio's next-g...3915 days ago
- +23 more Video
Bio-Scripts
Perl script introduces control structures, arrays and hashes.
...rict; use warnings; my @first_array = ('DNA', 'ATGCGTGC', 5, 'RNA', 'AUGC'); print $first_array[0], "...ol Loop: for for (my $i=0; $i 'ATCGATGCT', 'RNA' => 'AUGC', 'Number o...2860 days ago
- ...Databases size scales linearly with sequence length. With default parameters,databases are are roughly 150k per bas...
2691 days ago
- +56 more Bio-Scripts
Polls
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3524 days ago
Which of the followings are the best place to study Bioinformatics ?
...ts, next generation sequencing and other 'omics' techniques. Bioinformatics provides the tools to analyse and exploit such data sets.Can you please suggest me the best place to stud...3414 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...the cancer informatics and computational aided-drug design. I applaud Dr Altan fo...reveal the molecular profile of the disease through an integrated approach, and...for quick on-site applications are targeted through the development of a number...2360 days ago
Groups
...ity has increased substantially in recent years with the availability of huge genomic data and biological...ioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconducto...3949 days ago
...duplication. In 2011 the BioRuby project introduced the biogem software plugin system. Biogems are listed on biogems.info, with 2-3 new plugins being added every month....3918 days ago
- +5 more Groups
Comments
Comment on "Short-read assembly using Spades !"
...using various tools such as Trimmomatic or FastQC. Running SPAdes: After quality control, the next step is to run SPAdes. This can be done through a command-line interface or...413 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...sources of genomic data, such as gene expression or functional analysis. Overall, genome synteny analysis is a complex process that requires a thorough understanding of genome stru...421 days ago
- +68 more Comments
