Results for "Vector Control Research Centre (VCRC)"
Bio-Scripts
Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GNU Gene...hspcount++; } $count++; # flow contro...2927 days ago
Perl script introduces control structures, arrays and hashes.
#!/usr/bin/env perl use strict; use warnings; my @first_array...tting size: $another_way_of_getting_size_of_array\n\n"; # Contro...=> 2 ); print $sequence{'DNA'}, "\n"; # Contro...2875 days ago
- ➜ bin git:(master) ✗ ./fastq-dump --help Usage: ./fastq-dump [options] [...] ./fas...Use multiple times for more verbosity --ncbi_error_report Contro...
2139 days ago
Installing Porechop on Ubuntu !
➜ Tools git:(master) ✗ git clone https://github.com/rrwick/Porechop....(default: 16) Barcode binning settings: Contro..."none" bin) (default: False) Adapter search settings: Contro...2119 days ago
- ➜ Tools git:(master) ✗ git clone https://github.com/Nextomics/nextsv.git Clonin...Tools-static.dir/internal/bam/BamRandomAccessControll...nst int&, BamTools::Internal::BaiLinearOffsetVector...inter::print_body(Breakpoint*&, BamTools::RefVector...
2112 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/...bmitting spark jobs --spark-runner controls...--spark-submit-command may be specified to contro...------------------- Diagnostics and Quality Contro...
2088 days ago
Installing pb-assembly on Linux !
[jnarayan@hmem00 ~]$ module avail ----...conda-forge cryptography-vectors: 2.3.1-py27_1000...sarily ISO compliant, intended for Research Use Only and not for use #...sarily ISO compliant, intended for Resear...7b8_0 conda-forge cryptography-vector...2047 days ago
Setting up falconUnzip conda environments for genome assembly !
➜ Analysis_Results conda create -n denovo_asm Solving environmen...B bioconda cryptography-vectors...conda-forge cryptography-vectors: 2.3.1-py27_1000...####### | 100% cryptography-vectors | 30.5 MB | ################...y ISO compliant, intended for Resear...2003 days ago
Commands to install conda in Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads$ mkdir jittmp jit@jit-HP-Pro-3335-MT:~/Downloads$ cd jitt...information. Anaconda, Inc. has self-classified this software as Export Commodity Contro...1524 days ago
- (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 ---...
1455 days ago
