Results for "WA"
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Comment on "Benchmarking Perl Module !"
...module, which provides a simple and standardized way to measure and compare the p...the form of a subroutine that runs the code you want to benchmark. Here's an exa...chmark module provides a simple and standardized way to measure and compare the p...431 days ago
Comment on "Short-read assembly using Spades !"
...quencing reads. SPAdes (St. Petersburg genome assembler) is a popular software tool for short-read assembl...unning SPAdes is usually as follows: spades.py -o output_directory -1 forward_reads.fastq -2 reverse_read...431 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...all things into your conda-directory. When you install packages via cpan it will also print the folder perl is installing the package into. If you want to be extra-sure, you can a...432 days ago
Comment on "Short-read assembly using Spades !"
...erview of how to use SPAdes for short-read assembly: Install SPAdes: SPAdes can be downloaded from the official website (http://cab.spbu.ru/software/spades/). It is available f...437 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...genome synteny analysis: Choose the species: Select the species that you want to compare based on their e...e annotation: Annotate the genes in each genome using gene prediction software or tools such as MAKER. Id...439 days ago
Comment on "Download desire version of Blast software !"
Latest blast software and old versions https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/958 days ago
Comment on "Coronavirus Resources !"
Illumina toolkit for SARS-CoV2 https://sapac.illumina.com/informatics/biological-interpretation/coronavirus-software.html#about977 days ago
- Usage Summary Produce help page. Quickly check the software usage and available command line options. $ ./fastANI -h One to One. Compute ANI between single qu...
1117 days ago
Comment on "List of non-commercial NGS genotype-calling software"
...ariant and indel caller for mapped sequencing data. [ paper-2015 ]gridss – GRIDSS: the Genomic Rearrangement IDentification Software Suite. [ paper-2017&nb...1158 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...tics) conda config --add channels conda-forge # Install cpanm conda install perl-app-cpanminus # packagename is the name of the Perl package you want cpanm packagename1198 days ago
